Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr660g00005 ATGACGAAGGACGTTGAGGTTACTGAGCGTGGGTCGTTCTCTGGCAAGGACTACCATGACCCTCCTCCTGCACCCCTCATTGATGCTGAGGAGCTCACAAAGTGGTCCTTTTACAGGGCACTCATTGCTGAGTTCATTGCCACTATGCTTTTCCTCTACATCACTGTGCTCACAGTTATAGGGTACAAGCACCAGACTGATCTCAAGGCTAATGGTGATGTATGTGGTGGGGTTGGCATTCTTGGCATTGCATGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGGATTTCAGGGGGTCACATTAACCCAGCAGTGACATTTGGGCTGTTTTTGGCACGCAAGGTGTCTTTGATCCGAGCTATCATGTACATGGTGGCTCAGTGCTTGGGGGCTATCTGTGGAGTTGGGTTGGTGAAGGCCTTCCAAAAGGCTTACTTCAACAAGTATGGTGGTGGGGCTAATTCCCTCGCTGATGGCTACAGCAAAGGTACTGGATTGGGTGCTGAGATCATTGGCACCTTTGTTTTGGTATACACTGTCTTCTCTGCCACTGACCCCAAGAGGAGTGCTAGAGATTCCCATGTGCCGGTTTTGGCTCCACTTCCCATTGGATTTGCTGTATTCATGGTTCACTTGGCCACCATCCCAGTCACTGGCACTGGCATCAACCCTGCTAGGAGTCTTGGAGCTGCTGTTATCTACAACCAAGATAAGCCCTGGGATGACCATTGGATCTTTTGGGTAGGACCATTTGTTGGGGCAGCCATTGCAGCCTTCTACCACCAGTTCATCTTGAGAGCAGGTGCTGTTAAGGCTCTTGGATCATTCAGGAGTAACCCCAATTCTAGTACAAGTGTTACAGTGAGAAGACGGAAAAACCCAAGCGACTAA 906 0.4978 MTKDVEVTERGSFSGKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATMLFLYITVLTVIGYKHQTDLKANGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYFNKYGGGANSLADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQDKPWDDHWIFWVGPFVGAAIAAFYHQFILRAGAVKALGSFRSNPNSSTSVTVRRRKNPSD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 9 276 IPR034294 -
Mupr660g00005 301 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Mupr660g00005 301 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 MobiDBLite consensus disorder prediction 1 22 - -
Mupr660g00005 301 MobiDBLite consensus disorder prediction 1 16 - -
Mupr660g00005 301 NCBIfam MIP family channel protein 43 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 SUPERFAMILY Aquaporin-like 31 271 IPR023271 -
Mupr660g00005 301 Gene3D Glycerol uptake facilitator protein. 24 287 IPR023271 -
Mupr660g00005 301 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr660g00005 301 FunFam Probable aquaporin PIP1-2 24 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr660g00005 Mupr-Chr660 39346 43250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr660g00005 1 286 Major Intrinsic Protein MIP AT3G54820 83.566 6.01e-180 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr660g00005 K09872 - gmx:100817292 558.91