Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6607g00001 ATGGAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGTACTCCAGAAAAAAATGGTCATTCAGATGGTGCTTCAAAAAGTTCAGAACTCCTTCAGCAGTTCGTAAAATGTGGTCCAAAGAAGGAACTTCTTCGAACATGTTTTGACAAGGACAAAAAAAACATTTCGTCAAAAAGCAGGATGACTGAAGCTAAGTCAACCAGTAAGATAATTAAGAAACAAGACACAAAAAAAGTTTCTAGTTTGAGCCATCAGCCCTCTAGAAAACAACCTCGAAAGGGTGAAAACCCCACCCGACTCATACCTTCTCCTGACCAGTCTTCTGATTTTGGCCATTCAAACACTTGGATCTGTAAAAATGCTGCTTGTAGGGCGGTTCTGTCTATGGATGACACATTTTGTAGAAGATGCTCTTGCTGTATTTGTCATCTTTTTGATGATAACAAGGATCCCAGTCTCTGGTTGGTATGCACATCTGAATCTACTCAAGGGGACTCCTGTGGGTTGTCCTGCCATATCGAATGTGCCCTTCAACATGAAAAGGTGGGAGTTGTTGATCATGGGCAACTGATGCAACTAGATGGTGGTTATTGTTGCGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAGAAGCAGCTAAATATAGCAAAGGATGCCCGGCGTGTAGATGTACTCTGTTACAGGATATATTTGTGCTACAGGCTCCTGGATGGAACCTCAAAATTCAAAGAATTGCATCAAACAGTACAAGAGGCGAAGGCTAAACTGGAGACAGAAGTTGGTCCTGTCAATGGTGTTTCTGCCAAGATGGCTCGAGGCATTGTCAGCAGACTCCCTATTGCCAATGATATACAGAAACTTTGCTCTCTTGCTGTTGAGAAAGCTGATAGGTGGCTTGCCACTGTTCCCAATGTAAATCCAGATTCCACAGAGGGTTCACTTCCTGCCGCTTGCAAGTTTCTTTTTGAAGAGGTAACAACTTCCGCAGTGAAAATCATTTTGATTGAACTGTCAAATATATGTTCCGAGGAAATCAAGGGATACAAGCTCTGGTATTACAAGAGTCGGGACGAATCACCCACTAAAGATCCTGTTTCCGTGTTTCCCAAGTCTCAGAGGAGGATTTTGATATCCAACCTCAAGCCTTGCACAGAATATACTTTTCGGATTATATCTTACACTGATACATGTGACTTGGGTCATTCTGAGGCTAAGTGTTTCACCAACAGCATTGAGATAATTAAAAAAAATCCCTCTTCACCTGTTGCTATGAATCATGAAAAAGGGAACCTTCTAACTAGGGGCAATTCTTCGGGTTCCAAGATGGGGCTCAATGCCACATTGGAAGACTATGGATTCAAGGTTCGAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTCAAGAACAAGGTTACTTGGAAGAGATTTGCTGTGCCAACATGAAAAATTGTTGTGGACAAAGTGAAATGGATAAGCCTAGAATTCCAGAAGCACAATTGCCTTCAGTTTCGCGAGGCCTTGATTTAAATGTTGTTTCAGTGCCTGATTTAAATGAAGAGCTAACACCTCCTTTTGAGTATTCTAGGGATGAAGATAATGGTTGCTCTTTGCTGCAAGCTGTTGAGGCAGATGATGATGCTGCTTCGCATGATCTAGAGAAAAATGGTCTAGCAAGATCGCATGGGAGTGGGGATTCTCAAACCTGGACCCATGGGCCAACAGGAGAAGTGTCTGCTGTTGATTCTCGCATAGATATGTGCAGGAAAAGGATGGCAAGCACAATCGAAGAGACGCATGATTGTGACAGCACTTTAATAAATGGTTCTCCCTTACGTATATCTGATGGTTCATGTTCCTTGGATGAGAACTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACATGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTAAGGTCGACAGAGCAAGAACGCAGGGTGGTTAATACCTTTATTCAAACTCTTAGCGACGATCCAAGTAGTTTGGCAGGACAACTGACAAGTTTTGTCTTGCTAAAAGGATTTGCTTTGATGATCGCAAAAACAGTAGCTCATTTTTCCCAGGAGGGCAGATCTATGGACATGAAGTTTCAGGATAACTTGGGGTTTCTTCGGCTTGGTAGAGGAAGAGGGCTTGGAAGGGAAGTGAAATGCAATGGTTCAATGACGGTGATGAGAAAAGTGTGTGGTGGTTTGTTGGCATTGGCAGTGAAAGAGGTTGTGATTGCAATGCGATAG 2301 0.4255 MEVSGVQSLSSSVQSTPEKNGHSDGASKSSELLQQFVKCGPKKELLRTCFDKDKKNISSKSRMTEAKSTSKIIKKQDTKKVSSLSHQPSRKQPRKGENPTRLIPSPDQSSDFGHSNTWICKNAACRAVLSMDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLCYRLLDGTSKFKELHQTVQEAKAKLETEVGPVNGVSAKMARGIVSRLPIANDIQKLCSLAVEKADRWLATVPNVNPDSTEGSLPAACKFLFEEVTTSAVKIILIELSNICSEEIKGYKLWYYKSRDESPTKDPVSVFPKSQRRILISNLKPCTEYTFRIISYTDTCDLGHSEAKCFTNSIEIIKKNPSSPVAMNHEKGNLLTRGNSSGSKMGLNATLEDYGFKVRDLGKILRLAWAQEQGYLEEICCANMKNCCGQSEMDKPRIPEAQLPSVSRGLDLNVVSVPDLNEELTPPFEYSRDEDNGCSLLQAVEADDDAASHDLEKNGLARSHGSGDSQTWTHGPTGEVSAVDSRIDMCRKRMASTIEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKHEFRLKLLTWFSLRSTEQERRVVNTFIQTLSDDPSSLAGQLTSFVLLKGFALMIAKTVAHFSQEGRSMDMKFQDNLGFLRLGRGRGLGREVKCNGSMTVMRKVCGGLLALAVKEVVIAMR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6607g00001 766 Pfam PHD - plant homeodomain finger protein 120 238 IPR032881 -
Mupr6607g00001 766 MobiDBLite consensus disorder prediction 58 81 - -
Mupr6607g00001 766 MobiDBLite consensus disorder prediction 58 112 - -
Mupr6607g00001 766 Gene3D Immunoglobulins 307 409 IPR013783 -
Mupr6607g00001 766 MobiDBLite consensus disorder prediction 560 581 - -
Mupr6607g00001 766 CDD FN3 349 400 IPR003961 GO:0005515
Mupr6607g00001 766 SUPERFAMILY Fibronectin type III 328 400 IPR036116 GO:0005515
Mupr6607g00001 766 MobiDBLite consensus disorder prediction 1 29 - -
Mupr6607g00001 766 ProSiteProfiles Fibronectin type-III domain profile. 319 418 IPR003961 GO:0005515
Mupr6607g00001 766 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 688 IPR044514 GO:0010048|GO:0040029
Mupr6607g00001 766 CDD PHD_VIN3_plant 140 204 - -
Mupr6607g00001 766 MobiDBLite consensus disorder prediction 565 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6607g00001 Mupr-Chr6607 13015 20532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6607g00001 116 688 PHD Gene Family AT3G24440 48.644 1.17e-169 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6607g00001 - - gmx:100816128 1281.93