Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6602g00003 ATGGTAGCTGGTTGTTCTAAATTGTGTCTATGCTGGTGCTGGTGCCACTCCAACACCAAATCCAATCTTCATGACTTACCTGATAATATTGATGAGAATGGGAAGGAGGGTGAGAAGAAGGACTCAAACTCATGGGTTGGCTTCAGGGAGTTCACCTTGGAGCAACTCAGAAGTGCCACATCAGCATTTTCAACGGACAACATAGTATCAGAACATGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAGGATTGAAGATGACAGGGTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCCGATTCTCGACAGTTCCTAGAGGAAGCACGGGCAGTGGGGCAGCTGAGGAATGAGCGGCTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTCGTTGCAGAGTTTATGCCCAATGAAACTCTCTCTAAACATCTCTTTCACTGGGAGAGCCAGCCAATGAAATGGGCAATGAGGCTCAGAGTGGCCTTGTATTTAGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTGTATCACGATCTTAATGCTTATAGAGTTTTGTTTGATCAGGATGGAAACCCTAGGCTCTCTTGTTTTGGACTAATGAAAAACAGCAGAGATGGCAGAAGCTACAGCACAAATTTAGCCTTCACCCCACCTGAGTATTTGAGGACAGGAAGAATCACCCCAGAAAGTGTAATCTACAGTTTTGGCACACTCTTGCTTGATCTTCTAAGTGGCAAGCACATTCCACCCAGTCATGCACTTGACCTTATACGAGGCAAAAACTTTGTGATGCTGATGGACTCGTGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAGATAGTGAGATTAGCTTCACGCTGTTTACAGTATGAGCCTCGCGAGAGGCCAAACGCCAAGTCACTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTTCCATCACAAGTTTTGTTGGGCATACCAGATGAGAATGCCCCATCAAAGGAAGCAGTTCCATTGACACCTTTTGGTGAAGCTTGTTCTAGAAGAGATCTCACTTCAATATATGAAATTTTGGAAAGGGAGGGGTACAAGGATGATGAAGATATAGCGAATGAGCTTTCATTCCAAATGTGGACAGACCAAATACAAGCAACACTAAATTCTAAGAAGGAAGGAGATTCTGCTTTCCATACCAGAGACTTCTCTAAGGCCATTGAATGCTATACAAAATTCATCGATGGCGGAACCATAGTATCACCAACTGTGTATGTAAGGCGCTGCTTTTGTTACCTTATGAACAACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAAACAGTATCCCCCACATGGCCAACTGCATTCTATCTTCAAGCAGTGGCCCTCTTCAGCCTTGGGATGGACCATGATGCAGAGGAAAGTCTTAAAGATGGCACAACATTGGAAACCAGAAGACATAGAAATTGA 1497 0.4469 MVAGCSKLCLCWCWCHSNTKSNLHDLPDNIDENGKEGEKKDSNSWVGFREFTLEQLRSATSAFSTDNIVSEHGEKAPNVVYKGRIEDDRVVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFVMLMDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVPSQVLLGIPDENAPSKEAVPLTPFGEACSRRDLTSIYEILEREGYKDDEDIANELSFQMWTDQIQATLNSKKEGDSAFHTRDFSKAIECYTKFIDGGTIVSPTVYVRRCFCYLMNNMAQEALGDAMQAQTVSPTWPTAFYLQAVALFSLGMDHDAEESLKDGTTLETRRHRN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6602g00003 498 SUPERFAMILY Protein kinase-like (PK-like) 42 323 IPR011009 -
Mupr6602g00003 498 Gene3D Tetratricopeptide repeat domain 392 497 IPR011990 GO:0005515
Mupr6602g00003 498 FunFam probable serine/threonine-protein kinase At4g35230 38 141 - -
Mupr6602g00003 498 SUPERFAMILY TPR-like 397 488 IPR011990 GO:0005515
Mupr6602g00003 498 Pfam Protein tyrosine and serine/threonine kinase 80 317 IPR001245 GO:0004672|GO:0006468
Mupr6602g00003 498 FunFam probable serine/threonine-protein kinase At5g41260 143 334 - -
Mupr6602g00003 498 FunFam probable serine/threonine-protein kinase At4g35230 391 498 - -
Mupr6602g00003 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 13 497 IPR045845 GO:0004672|GO:0009742
Mupr6602g00003 498 ProSiteProfiles Protein kinase domain profile. 66 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6602g00003 498 Gene3D Transferase(Phosphotransferase) domain 1 143 334 - -
Mupr6602g00003 498 Gene3D Phosphorylase Kinase; domain 1 37 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6602g00003 Mupr-Chr6602 11647 15114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6602g00003 27 317 Glycoside Hydrolase AT3G07070 31.562 6.46e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mupr6602g00003 PK_Tyr_Ser-Thr 1.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6602g00003 - - gmx:100804210 913.679