LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6601g00007	ATGGGTTGTGGTTCTGAGCATTTTACCATGTTCTTCATCATCACCCTCTTCATGCTCCTATCATCACAAAGCACCCACATTTTGACTCTCTTCAATGCAGTGGGAAGCTTCCAAGTTCATGGCCTACCAGAGATGTATTTCATTGAAGAGAATAATGACAACCAGGTTAAGAAAATCTCAGGACTGGATGAGAGTGAAGAGAAACAAGCCTTGATAGTGGAGAAATTTAGATCCTTGCTTGGACTAAAGAGTTTCCACACCAAAGTACCACCAAATGATGATTTGGACTTTCTCTCTCCCTCACCTTCTCCATCTCCCAACTTTGAAGAAGCTCATGCTCCAGCTCCTTCTCCCCTTCCACACGTGCACCCTCACTCCCATCATCCACGACATCACAAGAATCCACCACTTCACAAAGCTCATCATGGAGATAGAGGCAGGGCCAAAAGAATACTAATAGCGGTTCTTGTATCTGCGGGGGTTGCTATGTTAATTGGTGCTTGTGGGTTATTCTTGGTGTGGAGGAAACTCTCAAATCACGCAAAGAAGCCCAAAAGGACAATGCCGGTATGTGGCAAAAACAAAGGAAGTGGAGGTGGAGGAGGGGCTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCGGGACTAGATCTGTTTTATCTTAATGCTTTAGGCGAGGACATAGAGCAACATGCTTTGAAAAAGACTTGCAACAAGGATGGTTTGGAATACAATAATGTTTGCGGTTCTTCCACTAAGGAAATTGCATCTGTTCATGATGAAGATGCGGAATTGGTGAAAGGTGAAGGTGAATCTGACGACGGCAACAATTCTTCGGGGGAAAGAATTATCCCCGAAGATTGCCATTCGTCAGACAATGAAAGTTTTCATTCCTTTGTTGATGATTCACACTCGAATAACAGACTCTCCAATGCTTCAGCTGGTAGTCTCAGTGAAACACTCTCTCTTCCTCTTTCCCCTCATAACTCAATCTCCAATATACAACCTCACCAATGTCCTAGTTCTCCACATAACTCAATCTCAAATACACAACCTCACCAATCACCAAATAGTCCAAAACATGAAGTGCAAGAGATTGAGAACTCTGTCCAATGTCCAAAAACCTTCACTTCCCCTCCACCTCCTCCTCCTCCACCACCACCACCACCACCACCACCTTTGCAAATGCCATTATTTACTTTGCATTCTCTCACTTCTTCATCTAGAGTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAATTTATCATCTCCCTTAAATTCAGACACTTTCTCAGGTTCAAATCAAAGTCCAGAAAAAGAGCTGCCTTCTCCACCTGCACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGCCCACCTCCATTTCCTAAAGGTGTCAAAACACCACCTCCTCCACCATCTCAACTCCCTCAATTCACCCCACTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAACCGCACAATGGTTTGGGATAAGCTACGATCAAGTTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTTTTTGGTTACAATTTGCAAAATTCAATTAAGAAGGACGAAACAAAGAGTAAAACCCCGTCTCCAAGCAAGCATGTACTTGAGCCAAAACGGCTGCAGAACATAACAATACTCTCAAAGGCTTTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGTAAAGTAAAACTCCTCAATTATGAAAATATGCCTCAAAAAAGGATCCCTTCCACGTTGTAA	1827	0.4362	MGCGSEHFTMFFIITLFMLLSSQSTHILTLFNAVGSFQVHGLPEMYFIEENNDNQVKKISGLDESEEKQALIVEKFRSLLGLKSFHTKVPPNDDLDFLSPSPSPSPNFEEAHAPAPSPLPHVHPHSHHPRHHKNPPLHKAHHGDRGRAKRILIAVLVSAGVAMLIGACGLFLVWRKLSNHAKKPKRTMPVCGKNKGSGGGGGAYQSSSSKVSLNSGLDLFYLNALGEDIEQHALKKTCNKDGLEYNNVCGSSTKEIASVHDEDAELVKGEGESDDGNNSSGERIIPEDCHSSDNESFHSFVDDSHSNNRLSNASAGSLSETLSLPLSPHNSISNIQPHQCPSSPHNSISNTQPHQSPNSPKHEVQEIENSVQCPKTFTSPPPPPPPPPPPPPPPLQMPLFTLHSLTSSSRVSSHSPLSLTSNNLSSPLNSDTFSGSNQSPEKELPSPPAPYPTQSPPNIPPPPCPPPFPKGVKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKKDETKSKTPSPSKHVLEPKRLQNITILSKALNATAEHVCEALMQGKVKLLNYENMPQKRIPSTL	608

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	286	302	-	-
	Mupr6601g00007	608	PANTHER	FORMIN-RELATED	12	401	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	376	398	-	-
	Mupr6601g00007	608	Gene3D	Formin, FH2 domain	489	601	IPR042201	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	107	122	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	443	484	-	-
	Mupr6601g00007	608	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	501	599	-	-
	Mupr6601g00007	608	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	488	608	IPR015425	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	93	144	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	320	499	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	266	305	-	-
	Mupr6601g00007	608	Pfam	Formin Homology 2 Domain	492	597	IPR015425	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	320	375	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	400	442	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	184	208	-	-
	Mupr6601g00007	608	MobiDBLite	consensus disorder prediction	123	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6601g00007	Mupr-Chr6601	51295	53211	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6601g00007	473	606	FH2 protein (formin) Gene Family	AT3G05470	68.889	9.99e-52	189

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6601g00007	-		-	gmx:100811929	717.613