Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr65g00005 ATGGGAACTTATATTGAAAATTTCACAAGTGAGGAGGATCATATCTTTCGTAGCCAATACTCATCTGTTCCTGTTCCTGACAATGTGACATTGCCGGAATTTGTGCTCCAAAACGCTGAACTGTATGCTGACAAGGTTGCATTTGTGGATGCTGTGACTGGAAAAGGGATCACTTATAGTGAGGTGGTGAGGGGCATACACAGGTTTTCAAAGGCCTTGAGATCTCTTGGTCTGAGGAAAGGGCATGTTGTGATTGTAGTGCTTCCAAATGTGATAGAGTATGCCATTGTTGCTTTGGGGATAATGGCTGCTGGTGGGGTGTTTTCAGGTGCAAATCCAGCATCACATGTATCAGAAATTAAGAAACAGGCCAAGTCTGCTGATGCCAAATTATTTGTCACAAATACCACAATCTATGAAAAGGTGAAGGGACTAGAGCTACCTATTATTGTGCTGGGAGATGAAGTTGTTGAAGGTGCTATGAATTGGAACAAGTTGCTTGAAGCAGCAGACCGTGCAGGTGATGATTTGGTAAAGGAGCCTATTCAGCAGAATGATCTCTGTGCCATGCCATTCTCATCAGGCACCACAGGAATGTCAAAGGGTGTGATGCTTACTCATAGAAATCTAGTGGCTAATCTTTGCTCTACACTCTTTGGTGTGACCCAAGAAATGGTGGGTTTGGTCACCACATTAGGCTTGATTCCCTTCTTTCACATTTATGGCATCACTGGAATATGTTGTGCCACTCTTAGGAGCAAAGGGAAAGTTGTCGTGATGGGAAGGTTTGAGTTGAAAACATTTCTCAATGCCTTGATCACACATGAGGTCACATTTGCACCCATTGTGCCCCCTATCATTCTCAGCTTGGTAAAAAATCCCATAGTGGATGAATATGACCTCAGCAAGCTAAAACTTCAGGCCATTATGACTGCAGCAGCACCACTTGCACCAGAACTCCTTAATGCTTTTGAACACAAGTTCCCTGGCGTTGCTGTCCAAGAGGCATATGGACTAACTGAGCATAGCTGCATCACACTCACTCATGCACAAAAAGGATTGGGAAGTCCTCATAAAAACTCAGTGGGGTTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGATACTGGTCGATCCCTCCCTAGGAACAAACCCGGGGAACTCTGTGTAAGAAGCCAATGTGTAATGCAAGGTTACTATAAACAGGTGGATGAGACTGCCCAGACCATTGACAAGAATGGATGGCTTCACACAGGTGACATAGGATTCATAGATAATGAAGAAAATGTGTTTATCGTTGATCGTATCAAGGAGTTGATTAAATACAAAGGTTTCCAAGTTGCTCCAGCAGAGTTAGAGGCCATTTTGCTGAGTCATTCATCAGTTGAAGATGCAGCTGTAGTGCCATTACCAGATGAAGAGGCAGGGGAAATCCCAGCTGCAAGTGTTGTTTTGAGCCCAGGTGCAAAAGAGAGTGAGGAGGACATCATGAACTATGTTGCCTCCAATGCTGCACATTACAAGAAAGTGAGAGTGGTGCACTTTGTGGAAGCCATACCAAAGTCACCCTCTGGGAAAATAATGAGGAGGCTTATCAAAGAGAAGATGGTGGAAAAGATCAAGACAAAATCTAAAACTATCTAA 1650 0.4364 MGTYIENFTSEEDHIFRSQYSSVPVPDNVTLPEFVLQNAELYADKVAFVDAVTGKGITYSEVVRGIHRFSKALRSLGLRKGHVVIVVLPNVIEYAIVALGIMAAGGVFSGANPASHVSEIKKQAKSADAKLFVTNTTIYEKVKGLELPIIVLGDEVVEGAMNWNKLLEAADRAGDDLVKEPIQQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVTQEMVGLVTTLGLIPFFHIYGITGICCATLRSKGKVVVMGRFELKTFLNALITHEVTFAPIVPPIILSLVKNPIVDEYDLSKLKLQAIMTAAAPLAPELLNAFEHKFPGVAVQEAYGLTEHSCITLTHAQKGLGSPHKNSVGFILPNLEVKFVDPDTGRSLPRNKPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDIGFIDNEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIPAASVVLSPGAKESEEDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLIKEKMVEKIKTKSKTI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr65g00005 549 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Mupr65g00005 549 Gene3D - 440 543 IPR045851 -
Mupr65g00005 549 SUPERFAMILY Acetyl-CoA synthetase-like 17 541 - -
Mupr65g00005 549 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Mupr65g00005 549 Gene3D - 13 439 IPR042099 -
Mupr65g00005 549 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Mupr65g00005 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 537 - -
Mupr65g00005 549 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 439 - -
Mupr65g00005 549 Pfam AMP-binding enzyme 37 444 IPR000873 -
Mupr65g00005 549 CDD 4CL 25 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr65g00005 Mupr-Chr65 38092 42163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr65g00005 11 539 Monolignol Biosynthesis Gene Families AT1G62940 72.316 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr65g00005 K01904 - gmx:100811418 1015.37