Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6589g00002 ATGAATTTGCTTAACTTTTTCATCCCCATGTCTAACTTCAGGTTCCAGTTCTGGCCATACATTAAGCTAATGATCATCTTCTTGCTCATCATACCAGACTTTGGACGAGCTTCTAATGCCTACAATAACCTTATTCGCACTTGCATCTCCTTAAATCCAGAATCAGTCGTATGTGGGTTAAATAACTGGAGATTTTTTTTTGTCAAGAAAGGTAACTTTTTACTGCATGGAGAGAGACATGTAAAAGAAAATGGAACTAAGGCCTTAGAGAAACTCATTTCTAGCAAGAACACAACTTATAAACCTGATGCAGAAACAACAAAGGCAATTAGCCCTACGGATAATAAAGAAACGCAACAGTGCTTATTGAAAGAGCATGTTGTGCAGACAAATGAGAAAAAGCTCCAAACAGAGCAAAAAGCGATCAAAGATTTGGAGGTGATCGAGAAAAAAGAAATTCCTGCAGGCATGCAAGATATTCCTCTGGTGCCTAACCTTGCACCTCCAAGTCAGAATGCTTCACCAGCCATGGTGGAAACTAAAGGAATAGTGGGGAAAGACACAGCTGGTGTAGAGCTTCCTCAGAGTTTTATACATAGGGAAGTGCAGAAAGAGTGGACTTGCGCTTTATGTAAAGTAACAACTTCGAGCGAGAAAACCTTGAGTATCCACCTTAATGGGAGGAAACACAGGGCAATTTGTGAAGCTATTAAAGCAAAGACTCAACCTGTTCCACAGAAGCTGAAAAGTAATCAGTCCAAAGAGGAATTGAAACAGAAGAACATTATCAATCAGCTAAATCCCAAGACCAAGAATGGAGAGAGTATAGTTAACAACGGGTTGAAGGGAGGAAAAGAAGTCAAGGATCATATGGTGCAAAAGAAACCTCGTGCAAGATTAAGATGTGAAGTCTGTAATGTCTATTGCCCTTGCAGGATTACCTTGGCCAATCACAACATGGGGAAGAAGCACTTGGCTAAAATTAAAAGTTTAATCTGA 999 0.3984 MNLLNFFIPMSNFRFQFWPYIKLMIIFLLIIPDFGRASNAYNNLIRTCISLNPESVVCGLNNWRFFFVKKGNFLLHGERHVKENGTKALEKLISSKNTTYKPDAETTKAISPTDNKETQQCLLKEHVVQTNEKKLQTEQKAIKDLEVIEKKEIPAGMQDIPLVPNLAPPSQNASPAMVETKGIVGKDTAGVELPQSFIHREVQKEWTCALCKVTTSSEKTLSIHLNGRKHRAICEAIKAKTQPVPQKLKSNQSKEELKQKNIINQLNPKTKNGESIVNNGLKGGKEVKDHMVQKKPRARLRCEVCNVYCPCRITLANHNMGKKHLAKIKSLI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6589g00002 332 SUPERFAMILY beta-beta-alpha zinc fingers 200 241 IPR036236 -
Mupr6589g00002 332 Pfam Zinc-finger of C2H2 type 301 324 - -
Mupr6589g00002 332 Pfam Zinc-finger of C2H2 type 206 230 - -
Mupr6589g00002 332 SUPERFAMILY beta-beta-alpha zinc fingers 289 331 IPR036236 -
Mupr6589g00002 332 SMART ZnF_U1_5 203 237 IPR003604 GO:0003676|GO:0008270
Mupr6589g00002 332 SMART ZnF_U1_5 297 331 IPR003604 GO:0003676|GO:0008270
Mupr6589g00002 332 PANTHER OS06G0651300 PROTEIN-RELATED 167 331 - -
Mupr6589g00002 332 Gene3D Classic Zinc Finger 283 330 - -
Mupr6589g00002 332 Gene3D Classic Zinc Finger 192 235 - -
Mupr6589g00002 332 SMART c2h2final6 300 324 IPR013087 -
Mupr6589g00002 332 SMART c2h2final6 206 230 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6589g00002 206 329 C2H2 Transcription Factor Family AT2G19380 26.613 1.86e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6589g00002 - - gmx:100812073 429.098