Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6582g00001 ATGCCTTCTGTGCGATTTCGTGTGGTGAAGTTCACAGCTGAAGAGCTACGTCGCATTATGGACTATAAGCACAATATCCGTAATATGTCTGTCATTGCTCATGTTGACCACGGAAAATCAACTCTCACTGATTCTCTTGTTGCTGCTGCTGGCATTATTGCTCAAGAAGTGGCAGGTGATGTCCGTATGACCGATACCCGTGCAGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACGGGTATCTCACTCTACTATGAAATGTCTGATGAGTCCCTCAAGAATTATAAGGGAGAGCGCCAAGGGAATGAGTATCTCATTAATCTCATTGACTCCCCTGGGCATGTGGACTTCTCATCTGAGGTTACTGCTGCACTTCGCATTACTGATGGAGCTCTAGTTGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACTGAAACTGTGCTACGACAAGCCCTGGGAGAAAGGATTAGGCCTGTTCTGACTGTTAACAAGATGGACAGATGCTTCCTTGAACTTCAAGTGGATGGAGAGGAGGCTTACCAGACATTTCAAAGGGTTATTGAGAATGCTAATGTCATCATGGCTACCTATGAAGATCCACTACTTGGTGATGTTCAGGTCTATCCAGAGAAAGGAACAGTTGCTTTTTCTGCTGGTTTGCATGGTTGGGCCTTTACCTTGACCAACTTTGCCAAGATGTATGCTTCTAAGTTTGGAGTTGATGAAGCAAAGATGATGGACAGGCTCTGGGGTGAAAACTTCTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAACACTGGTTCTGCTACCTGCAAGCGTGGGTTTGTTCAATTCTGTTATGAGCCTATCAAGCAGATAATTAACACTTGTATGAATGATCAGAAGGATAAGTTGTGGCCTATGCTGCAAAAGCTTGGAGTTGTCATGAAATCTGACGAGAAGGACCTCATGGGTAAAGCATTGATGAAGCGTGTCATGCAAACCTGGCTCCCAGCAAGTAGTGCACTCTTGGAAATGATGATATTTCATCTTCCATCTCCGGGAACAGCCCAGAAGTATCGTGTGGAGAATTTGTATGAGGGTCCCCTTGATGATCAATATGCATCTGCTATCAGAAGCTGTGATCCTGAAGGTCCTCTGATGCTCTATGTCTCAAAGATGATTCCAGCATCTGATAAGGGTAGGTTTTTTGCTTTTGGCCGTGTATTCTCTGGCAAGGTTTCAACTGGTTTGAAGGTCAGGATTATGGGACCAAATTATGTCCCTGGGGAGAAAAAGGACTTGTATGTTAAAAGTGTTCAACGAACTGTAATTTGGATGGGAAAGAAACAGGAAACTGTTGAGGATGTGCCTTGTGGTAACACTGTGGCTATGGTTGGTTTGGATCAATATATCACCAAGAATGCGACTTTGACAAATGAGAAGGAAGTTGATGCCCATCCTATCCGAGCTATGAAGTTTTCTGTCTCACCTGTTGTCCGTGTTGCTGTTCAGTGTAAGGTTGCATCAGATCTTCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCCAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGTGAACACATTGTTGCTGGTGCAGGAGAGCTTCATTTAGAGATCTGTTTGAAGGACTTGCAGGAAGATTTCATGGGTGGTGCTGAGATTATTAAGTCTGACCCTGTTGTGTCATTCAGGGAGACTGTCCTGGAGAGATCAGTTCGCACTGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTATACATGGAAGCAAGACCAACGGAGGAGGGTCTTGCTGAAGCCATTGATGATGGCAAGATTGGACCAAGAGATGACCCCAAAGTCCGTTCTAAAATCTTATCTGAAGAGTACGGTTGGGATAAGGATCTTGCCAAGAAAATTTGGTGTTTTGGCCCTGAGACCACTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAGTATTTGAATGAAATCAAGGATTCCGTAGTTGCTGGATTCCAGTGGGCCTCAAAAGAAGGTGCATTGGCCGAAGAAAACATGAGAGCCATCTGCTTTGAAGTATGTGATGTTGTCCTGCACGCTGATGCTATCCATAGAGGAGGTGGTCAGATCATTCCTACTGCTAGGAGAGTCTTCTATGCTTCCCAGCTGACCGCAAAGCCCAGGCTTCTTGAGCCTGTTTACCTGGTAGAAATCCAGGCTCCAGAGCAAGCTCTTGGTGGTATTTACAGTGTTCTTAACCAGAAACGTGGACATGTATTTGAGGAAATGCAGAGGCCAGGTACCCCACTTTACAACATCAAAGCATACCTCCCTGTCATCGAGTCCTTTGGATTCTCAAGCACATTGAGGGCTGCAACATCAGGCCAGGCCTTCCCACAGTGTGTCTTTGATCACTGGGATATGATGTCCTCAGATCCATTGGAGTCTGGATCACAGGCTGCACAACTTGTTGCTGACATTCGGAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCTCTCTCTGAGTATGAAGACAAGCTTTAA 2553 0.4544 MPSVRFRVVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDESLKNYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMDRLWGENFFDPATKKWTSKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVVMKSDEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPGTAQKYRVENLYEGPLDDQYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSVRTVMSKSPNKHNRLYMEARPTEEGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEYEDKL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6582g00001 850 Gene3D - 577 729 IPR014721 -
Mupr6582g00001 850 Pfam Elongation factor G, domain IV 617 729 IPR005517 GO:0005525
Mupr6582g00001 850 SUPERFAMILY Translation proteins 349 483 IPR009000 -
Mupr6582g00001 850 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 24 351 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 Pfam Elongation factor Tu GTP binding domain 24 349 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 SMART EFG_C_a 731 820 IPR000640 -
Mupr6582g00001 850 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 15 849 - -
Mupr6582g00001 850 CDD EF2_snRNP_III 494 566 - -
Mupr6582g00001 850 Gene3D - 10 244 IPR027417 -
Mupr6582g00001 850 SMART EFG_IV_2 612 729 IPR005517 GO:0005525
Mupr6582g00001 850 FunFam Translation elongation factor 2 576 729 - -
Mupr6582g00001 850 CDD EF2 27 237 - -
Mupr6582g00001 850 FunFam Translation elongation factor 2 730 850 - -
Mupr6582g00001 850 SUPERFAMILY EF-G C-terminal domain-like 734 845 IPR035647 -
Mupr6582g00001 850 CDD aeEF2_snRNP_like_IV 566 738 - -
Mupr6582g00001 850 FunFam Translation elongation factor 2 493 570 - -
Mupr6582g00001 850 Gene3D - 730 850 - -
Mupr6582g00001 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 348 IPR027417 -
Mupr6582g00001 850 FunFam Translation elongation factor 2 10 244 - -
Mupr6582g00001 850 Pfam Elongation factor G C-terminus 731 818 IPR000640 -
Mupr6582g00001 850 NCBIfam small GTP-binding protein domain 27 183 IPR005225 GO:0005525
Mupr6582g00001 850 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 IPR031157 -
Mupr6582g00001 850 PRINTS GTP-binding elongation factor signature 108 118 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 PRINTS GTP-binding elongation factor signature 72 80 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 PRINTS GTP-binding elongation factor signature 28 41 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 PRINTS GTP-binding elongation factor signature 124 135 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 PRINTS GTP-binding elongation factor signature 160 169 IPR000795 GO:0003924|GO:0005525
Mupr6582g00001 850 CDD eEF2_snRNP_like_C 734 812 - -
Mupr6582g00001 850 Pfam Elongation Factor G, domain III 494 556 IPR041095 -
Mupr6582g00001 850 Pfam Elongation factor Tu domain 2 401 474 IPR004161 GO:0005525
Mupr6582g00001 850 SUPERFAMILY Ribosomal protein S5 domain 2-like 569 733 IPR020568 -
Mupr6582g00001 850 Gene3D Elongation Factor G (Translational Gtpase), domain 3 493 570 - -
Mupr6582g00001 850 CDD EF2_II 382 477 - -
Mupr6582g00001 850 Gene3D Translation factors 350 491 - -
Mupr6582g00001 850 FunFam Translation elongation factor 2 350 491 - -
Mupr6582g00001 850 SUPERFAMILY EF-G C-terminal domain-like 491 567 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6582g00001 Mupr-Chr6582 2879 6607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6582g00001 8 850 Eukaryotic Initiation Factors Gene Family AT1G56070 92.527 0.0 1649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6582g00001 K03234 - gmx:100804251 1647.48