Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6579g00001 GCAAGGGATAGCAGAAACGACGCCGTATTGATCAACGACTCTCTCCTTTGCTACTCACCTTTCGAAGACGACGACCGTGTCAGACAAACGGTGCCAGTTGGTGGTGCCGCCATTAAGCTTATCTCATACACGACGTCGTGGGTGATGGCAGTTGCTAAGGAGACTACTAGTTCCAAGGTTGTGTTGGTTTTATTTAAATGCTTGAGCGAGCCGGGGAATCAACCATATGGATATAGAAGAGCCAGACTACCTCCAAATTGTGGAGAAGAAATTAGGCCAATGGCATCTTCTTCAGACTCATGGATGAAGGAATACACTGAAGCTGTGAAACTCGCTGATGACATCACTGGCATGATTTCTGAACGTAGTTCACTCCCTGCATCTGGACCAGAAACCCAGCGGCATGCATCTGCTATAAGAAGGAAGATCACAATATTAGGGACCAGACTTGATAGCTTGCAATCTCTTTTGACAAAGCTCCCTGCAAAAACTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTGCAAATTTGAGGACAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCTAATAGGGATAGTTTGCTGGGGCCAGAAATAAAAACAGATCCAATGACCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAAAGGCAAATTATGAAAGAGCAAGACGATGGCCTTGAGAAATTAGAGGAGACTGTACTCAGTACTAAACATATTGCGTTGGCAGTGAATGAAGAGCTGGATCTACACACCAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGCGGGTGCAGAAGAACTTGGCAGTTTTGAACAAACGTACCAAAGGTGGTTGCTCTTGCTTGTGCATGCTTTTATCAGTGATTGGTATAGTGGTTTTGATTGTTGTCATATGGCTGTTGATT 957 0.4451 ARDSRNDAVLINDSLLCYSPFEDDDRVRQTVPVGGAAIKLISYTTSWVMAVAKETTSSKVVLVLFKCLSEPGNQPYGYRRARLPPNCGEEIRPMASSSDSWMKEYTEAVKLADDITGMISERSSLPASGPETQRHASAIRRKITILGTRLDSLQSLLTKLPAKTEKEMNRRKDMLANLRTKVNQMASTLNMSNFANRDSLLGPEIKTDPMTRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVLSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVVLIVVIWLLI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6579g00001 319 Pfam SNARE domain 263 314 IPR000727 -
Mupr6579g00001 319 SMART tSNARE_6 221 288 IPR000727 -
Mupr6579g00001 319 SUPERFAMILY SNARE fusion complex 217 287 - -
Mupr6579g00001 319 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 226 288 IPR000727 -
Mupr6579g00001 319 CDD SNARE_Qc 229 286 - -
Mupr6579g00001 319 PANTHER SYNTAXIN 124 311 IPR045242 -
Mupr6579g00001 319 Gene3D - 228 290 - -
Mupr6579g00001 319 FunFam syntaxin-51 isoform X2 228 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6579g00001 Mupr-Chr6579 1827 9653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6579g00001 94 319 SNARE and Associated Proteins AT1G16240 71.616 4.73e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6579g00001 K08503 - gmx:100794038 387.882