Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6571g00001 GTAGTTAAGGTGTTGACAATTGATAGTGATACTCCTGAGTCAGGGATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTCAAGGCAGGATTTGCTGGTGATGATGCTCCCAGGGCCGTGTTTCCCAGTATTGTTGGCAGGCCTCGACATACTGGTGTTATGGTTGGGATGGGTCAAAAGGATGCCTATGTAGGTGACGAAGCCCAATCAAAAAGAGGTATTCTTACTCTGAAGTATCCCATTGAGCATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATCTGGCATCACACATTTTATAATGAACTTCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTTACTGAGGCTCCTCTCAACCCAAAGGCCAACAGAGAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCTATCCAGGCTGTTCTCTCCTTGTATGCCAGTGGTCGCACAACTGGTATTGTTTTGGACTCTGGCGATGGTGTGAGTCACACTGTACCAATCTATGAGGGGTATGCGCTCCCCCATGCCATCCTTCGTTTGGATCTTGCTGGTCGTGATCTAACTGATCATTTAATGAAGATCCTCACTGAGAGAGGGTACATGTTCACCACCTCTGCCGAGCGAGAAATTGTTCGTGACATGAAGGAGAAGCTTGCATATGTTGCCCTAGATTATGAGCAAGAAATTGAGACTGCAAAAAGCAGTTCTTCAGTTGAGAAAAGCTATGAGCTTCCTGATGGACAAGTTATCACAATTGGGGCAGAGAGATTCCGATGCCCAGAAGTTCTTTTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGAATTCATGAGACCACCTACAATTCTATCATGAAGTGCGATGTGGATATCAGAAAGGATCTGTATGGCAACATTGTTCTTAGTGGTGGCTCAACTATGTTTCCTGGTATTGCAGACCGGATGAGCAAGGAGATCACTGCTCTTGCTCCTAGCAGCATGAAGATTAAGGTTGTGGCTCCACCAGAAAGAAAGTATAGTGTCTGGATCGGAGGATCGATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGATTTCTAAAGGTGAATATGATGAGTCTGGCCCATCCATTTTCTTGCTCATAAATTCATACTGCAGTTATGTTGAACTACCAAAACATTTGACTGGGAGAGTCATAAAGTGA 1230 0.4561 VVKVLTIDSDTPESGMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQEIETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIFLLINSYCSYVELPKHLTGRVIK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6571g00001 409 Gene3D - 155 355 - -
Mupr6571g00001 409 ProSitePatterns Actins and actin-related proteins signature. 121 133 IPR020902 -
Mupr6571g00001 409 Pfam Actin 20 386 IPR004000 -
Mupr6571g00001 409 FunFam Actin, alpha skeletal muscle 51 88 - -
Mupr6571g00001 409 FunFam Actin, alpha skeletal muscle 18 181 - -
Mupr6571g00001 409 PANTHER ACTIN 24 385 IPR004000 -
Mupr6571g00001 409 ProSitePatterns Actins signature 2. 373 381 IPR004001 -
Mupr6571g00001 409 SUPERFAMILY Actin-like ATPase domain 21 170 IPR043129 -
Mupr6571g00001 409 SUPERFAMILY Actin-like ATPase domain 164 387 IPR043129 -
Mupr6571g00001 409 Gene3D Actin; Chain A, domain 4 197 288 - -
Mupr6571g00001 409 PRINTS Actin signature 43 52 IPR004000 -
Mupr6571g00001 409 PRINTS Actin signature 66 77 IPR004000 -
Mupr6571g00001 409 PRINTS Actin signature 78 100 IPR004000 -
Mupr6571g00001 409 PRINTS Actin signature 157 176 IPR004000 -
Mupr6571g00001 409 PRINTS Actin signature 132 145 IPR004000 -
Mupr6571g00001 409 PRINTS Actin signature 253 269 IPR004000 -
Mupr6571g00001 409 CDD NBD_sugar-kinase_HSP70_actin 25 198 - -
Mupr6571g00001 409 FunFam Actin, muscle 197 288 - -
Mupr6571g00001 409 FunFam Major actin 275 355 - -
Mupr6571g00001 409 ProSitePatterns Actins signature 1. 70 80 IPR004001 -
Mupr6571g00001 409 Gene3D - 25 386 - -
Mupr6571g00001 409 FunFam Putative actin-related protein 5 356 384 - -
Mupr6571g00001 409 SMART actin_3 22 393 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6571g00001 Mupr-Chr6571 4371 6769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6571g00001 16 386 Cytoskeleton Gene Families AT5G09810 97.574 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6571g00001 K10355 - gmx:100798052 743.806