Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6567g00006 ATGAAGGAGACGGTTGTTGATAAAAAAGAAAGAAAGGAAGAAGCTTCACTTCAAGGCAATGGAGACCCTGCAACCAACTGCAACTGTACAAATTTGGTGGACACGCCTAAATCTTCTACTCTCATTATACTTATTATACTTACTCTCAACCTCATCACCCCCCACACCAACATGGAAGCCAGCGCGGGTCTCGTCGCTGGTTCTTACAATCGCAACGAGCTCGTTGTCATTCATAGCCATGAAGAGCACAAACCTTTGAAGAACTTGGATGGACAAGTGTGTGAAATATGTGGCGATGATGTGGGACTCACCGTGGATGGAGACTTGTTTGTGGCTTGCAATGAATGTGGTTTTCCTGCATGCCGACCTTGCTATGAGTATGAAAGAAGAGAAGGGAGACAGCTTTGCCCACAGTGCAAGACCAGATACAAGCGTCTCAAAGGGAGCCCGCGGGTTGAGGGAGATGAAGATGAGGAGGATGTGGATGATATCGAACACGAATTCAATATCGAGGACCAAATGAACAAGCATAACCATTCTGCTGAGTCCATGCTGCATGGAAAGATGAGCTACGGAAGAGGTCCTGAAGATGATGAGAATGCTCATTTTCCAGCTGTTATTGCTGGAGGTCGCTCTCGACCTGTTAGTGGGGAGTTTCCACTAACATCTCATTATGGGGAACAGATGTTAGCTTCATCGCTGCATAATCGAGTGCATCAATATCCACCATCTGATCCTCGTAAGATTCTACTTCAACATGGTGAAATTTATTTACAATATGTGATGTGGCATGCTGTTACCAAAGCAGGAAGTGGAAGGTGGGATGAAACCAAAGAGGATAGAATGGATGACTGGAAGTTCCAACAGGGCAATTTGGGGCCTGAACCTGATGAAGATCCAGATGCAGCCATGTTAGATGAAGCAAGACAACCACTGTCAAGGAAGGTACCAATAGCATCGAGCAAAGTGAATCCATATAGGATGGTGATCGTGGCACGGCTTGTTGTCCTTGCTTTCTTCCTCCGATATAGACTTATGAATCCTGTACATGATGCACTGGGGCTGTGGCTAACTTCTATTATATGTGAAATCTGGTTTGCTTTTTCATGGATCCTTGATCAGTTTCCCAAATGGTGTCCCATTGATCGAGAGACCTACCTTGATCGTCTTTCAATCAGGTATGAGCGGGAAGGTGAACCCAACATGCTTGCTCCTGTGGATGTCTTTGTTAGTACTGTGGATCCCATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTTTCAATCTTGGCCATGGATTACCCAGTTGATAAGATATCGTGTTACATTTCTGATGATGGAGCTTCAATGTGTACATTTGAAGCCCTGTCAGAAACTGCGGAGTTTGCTAGGAAGTGGGTACCATTCTGCAAGAAATTTTCAATAGAACCCAGAGCACCAGAGATGTACTTCTGTGAGAAAATTGACTACCTCAAGGACAAGGTGCAGCCCACCTTTGTTAAGGAGCGTCGAGCTATGAAGAGAGAATATGAAGAGTTTAAGATTAGGATCAACGCACTTGTGGCAAAAGCTCAGAAGGTTCCTCCAGGAGGGTGGATTATGCAGGATGGGACACCATGGCCAGGAAACAATACTAAGGACCATCCTGGTATGATTCAAGTCTTTCTTGGTCACAGTGGAGGTCATGACACCGAAGGAAACGAGCTTCCTCGTCTTGTTTATGTTTCCAGAGAGAAAAGGCCCGGATTCCAACACCACAAGAAAGCTGGTGCTATGAATTCTTTGGTAATTCGGGTCTCTGCTGTGCTCACAAATGCTCCTTTCATGCTGAACTTGGACTGTGATCATTATGTCAACAACAGCAAGGCTGCTCGAGAGGCCATGTGCTTCTTAATGGACCCCCAAACTGGGAAGAAGATTTGCTATGTCCAGTTTCCTCAAAGATTTGATGGCATTGATAGGCATGATCGTTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCTGCATATGTTGGCACAGGGTGTGTATTTAGGAGGCAAGCTTTATATGGCTACAATCCTCCCAAGGAACCCAAGCGTCCAAAAATGATAAGCTGTGATTGCTGCCCATGTTTTGGAAAGCGAAAGAAGGTTAAGTATGCAGGGAATGATGCAAATGGAGAGGCAGCAAACCTAAGAGGTTCTCATATTCCTAATCACTAA 2238 0.4495 MKETVVDKKERKEEASLQGNGDPATNCNCTNLVDTPKSSTLIILIILTLNLITPHTNMEASAGLVAGSYNRNELVVIHSHEEHKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPACRPCYEYERREGRQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFNIEDQMNKHNHSAESMLHGKMSYGRGPEDDENAHFPAVIAGGRSRPVSGEFPLTSHYGEQMLASSLHNRVHQYPPSDPRKILLQHGEIYLQYVMWHAVTKAGSGRWDETKEDRMDDWKFQQGNLGPEPDEDPDAAMLDEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRLMNPVHDALGLWLTSIICEIWFAFSWILDQFPKWCPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKIRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNSLVIRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKICYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFRRQALYGYNPPKEPKRPKMISCDCCPCFGKRKKVKYAGNDANGEAANLRGSHIPNH 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6567g00006 745 FunFam Cellulose synthase 76 167 - -
Mupr6567g00006 745 Pfam Zinc-binding RING-finger 84 161 IPR027934 -
Mupr6567g00006 745 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 309 704 - -
Mupr6567g00006 745 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 167 IPR013083 -
Mupr6567g00006 745 MobiDBLite consensus disorder prediction 1 20 - -
Mupr6567g00006 745 Pfam Cellulose synthase 406 729 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mupr6567g00006 745 MobiDBLite consensus disorder prediction 1 17 - -
Mupr6567g00006 745 CDD mRING-HC-C4C4_CesA 92 142 - -
Mupr6567g00006 745 SUPERFAMILY RING/U-box 78 166 - -
Mupr6567g00006 745 FunFam Cellulose synthase 523 698 - -
Mupr6567g00006 745 Coils Coil 504 524 - -
Mupr6567g00006 745 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 552 698 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6567g00006 Mupr-Chr6567 49540 52785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6567g00006 58 740 Cell Wall Biosynthesis AT5G17420 80.000 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6567g00006 K10999 - gmx:100779834 1291.17