Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6566g00001 ATGGAACAAAAAGCTTGCGAAGAATCATCCAAAATCGCTTTGGGTTTAAAGTGCGAGAAGGTTCTCGAAGCGGTTGATGAATCAATTGCATGCCCCACTCCACAGAAGAATGCTGAACCCTTGACCATCAAATCCAGAGAGGGAAAAACCCAGATTCCACAGGAATATTGGGCGCTTGCAGAATTGTTTGGTCACATGAGCTGTTCACTCAGGTTGCTGCTTCTGTTTAAGAAGACCCCAATTTTTCAAAATATTTGCCGCCAAGTTGAAGTTCTTTCGAAGAGGAAATTCTCCTATACCCATCTTGCGCAGATGAAGTATATAATACCCGAAAGTGTTTGTATAGATAAAGTGCTTGTTCATGATAAGAAGAGTTTGTGTATGATGGCTGATATGAAGATTACCTTAAGATATGAGGTTGTGCAAGACAGCTCCGGTGTATCTGCCGATCTAGCTCTTCGTCGATATTTTAATTCTAGGCTGATTAATTTCTTTGATACGCATCCCGAGGTTGCTGACATTCCAGAGGCTCCACTGCCAGACCCCTTTAACAAAAAAATTTATAGCTTCAATCGTGAAGATTCAGATGTTGAAAAATTTACATGCCAATCTTCACATGTGAACAATTCAACAGCACTTTTGTCAATTACCAATCAAATTGAAATATTGCCTGAAAAATTCCAAGTGTATCCATCTTTTAGGAGACATTTTTCTCGGAAGAATGTTGCTGTTGCTGAGCAGGTAGAAAAGGCTCAGTGTTTTTCATCCACAAAAACTTCTCTACCATCTCATGCATCTGATTGCCTGGATAACGAAGAAAATAAAAAGGCACTGCAGAAAGGATGTGCACCATTGTCTGATCACGTGGCTAATCTGAATATGGAAAGAGGGCACCAGAAGGAATCTTTCTCTCAGTCTTTTCAACCTAGTATTATTAATACACCAGTACATATGATCCGCCCTCCACATTCCGTTACTTACAATAGTTTTGAAAGCCCAGATATGAAAAATGTCTCCTGTGCTGCTGATAGTTTTGTAACAGAGACACCTGCCCGGTCAGCGCCTGCGAGATTATTGCCCATTTCTGATGTCAAGCTTCAAAACACGCCTATCCACAAGTCAACATCATGTCATAAGCTAGCAAAAAGAGTGCTTGACTTTTCACTCATGGAAGACAATGATGGCTTGGACATTAGAGTGGACAAATTAGAATCTAGCAGAGCTCTGCATGAAATTGATAGCTTTCCTGAATCTAGCAGAGGATGTTCTGAGGATTGCAATTCGTTTGGTTCTGTTTCTGTACCTCAGGAGGCAGAAGAGAGCCTTGGTTACTCTTTTGAGAAAATCACCCAAAACCAAGCTGGTTTAGATACACGGCATAAAAAATCTTCACCATTGCTGAATCTGGTTAATGTGATTACCTCTATATTTCAATCTGTCAACAGAAATCCAATCACAAAAGAGGAGCTGCTGCAAAAGATACTTATGAACAGTTTGGATTTTGTCAATATTGTTGTTTTACTACATGGTATCTTGTTGATTCTAACTAATATTGCCATCCCTATAGGAGAAGTTGAAGAACAGGTTGAGTCTCTGGAGAAGTTGGTGCCAGACTGGATCTGCAAGAAATCGGTTCTTATTGGAGATATGTACTGGTGGGTCTCTTTCTGTTTACTGTTAATTAGATCTCTAGCAATCATCAAGAAAGTGTCAGATTTGGACTCAGTACGATCAAGGCTTTCCAGCAACGAGTCTTTAAGTAACCAGTTGTTGCGACTTAGAAAGCCACATATGTGGCCTAGTGTTTCTACATATTAA 1818 0.4004 MEQKACEESSKIALGLKCEKVLEAVDESIACPTPQKNAEPLTIKSREGKTQIPQEYWALAELFGHMSCSLRLLLLFKKTPIFQNICRQVEVLSKRKFSYTHLAQMKYIIPESVCIDKVLVHDKKSLCMMADMKITLRYEVVQDSSGVSADLALRRYFNSRLINFFDTHPEVADIPEAPLPDPFNKKIYSFNREDSDVEKFTCQSSHVNNSTALLSITNQIEILPEKFQVYPSFRRHFSRKNVAVAEQVEKAQCFSSTKTSLPSHASDCLDNEENKKALQKGCAPLSDHVANLNMERGHQKESFSQSFQPSIINTPVHMIRPPHSVTYNSFESPDMKNVSCAADSFVTETPARSAPARLLPISDVKLQNTPIHKSTSCHKLAKRVLDFSLMEDNDGLDIRVDKLESSRALHEIDSFPESSRGCSEDCNSFGSVSVPQEAEESLGYSFEKITQNQAGLDTRHKKSSPLLNLVNVITSIFQSVNRNPITKEELLQKILMNSLDFVNIVVLLHGILLILTNIAIPIGEVEEQVESLEKLVPDWICKKSVLIGDMYWWVSFCLLLIRSLAIIKKVSDLDSVRSRLSSNESLSNQLLRLRKPHMWPSVSTY 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6566g00001 605 Gene3D - 455 586 IPR038090 -
Mupr6566g00001 605 SMART CDT1_2 52 181 IPR014939 -
Mupr6566g00001 605 Pfam DNA replication factor CDT1 like 53 116 IPR014939 -
Mupr6566g00001 605 PANTHER DNA REPLICATION FACTOR CDT1 39 581 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mupr6566g00001 605 SUPERFAMILY "Winged helix" DNA-binding domain 46 183 IPR036390 -
Mupr6566g00001 605 CDD Cdt1_m 44 185 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6566g00001 Mupr-Chr6566 5017 9390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6566g00001 49 170 Core DNA Replication Machinery Family AT2G31270 38.400 4.97e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6566g00001 K10727 - gmx:102670055 786.178