Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6555g00002 ATGGCTGTAGTGAGTCCTATGCCTACAACTCCACAGCGGATCAATTCCGTGAACTCGCTTCGTGATATTGGGGTTCCTGGAATCATGACCAATAGGAGAGAAATTGTGAATGAGCCTAGTCTAAGTAGGGTTAATGACACAATCTATGTTGCTGTGGCAAAAGATGTGAAAGACAGCAAATTAAATCTGATATGGGCGATACAAAACTCGGGAGGAAGGAGAATTTGCATCCTTCATGTTCACGTGCCGACACCTATGATCCCCTTGATGGGTGCTAAATTTCCTGCAAGTGCGCTGAGTGAGCAGGAAGTCCAAGCTCACCATGAAAGAGAAAGGCTAAATATGCACAAGACTATGGATGCCTATCTTCTTATCTGTCAAAGGATGGGGGTGCGGGCTGGGAAACTACTCATTGAAATGGATTGCATAGAAAAAGGAATAGTAGAACTCATCTCCTACTATGGCATAAAGAAGCTTATAATGGGAGCAGCATCTGATAAGTACCATTCTAGGAGAATGACAACCCTCAGATCTAAGAAAGCTATATATGTATGTGAACAAGCACCGGCTCCTTGTCATATACAGTTTATCTGCAATGGGTACCTTATACACACAAGGGATTGCAGTTTGGATAGAGGAAATGTAGAGCAAATGGCAAAGTCTGAAGTTGGGCGTTCGCCTCACTTGAGATCTCAATCTGTTACGCTAGGGCAAAATCATTGGGTGAAACTAACTAGTCCAGCTCAAGAGTTATTTCGTAGAGTAAGGACTATCAATGATGGACATAGGAGGAGCCCTGCATCTGTTTCTTCTTCAGAAGGGTTTTTAACTCCACAGCGCAAGTTTGGTAGAGAAGTAAGTTCTGATGAGTTAGATGGGCCATCACGATGGAGTCCTTCAGTTTTCTCAATGTGCTGTAACAGTGGTTTGATTGAACCAGTATTGACCCCAAATTTGATTAGTGATGGCAGTGAGAATGTATTAGACTTGAATTTAAATGGCCTTTCTCCCATTAGTGAGGATCTTCATCATTCATCACCTCCTAGAGTACTGGATGGAGAAATGGAAAATGCTCTCTATGATCAACTTGAACAGGCAATGGCTGAGGCTGCGAATGCTAAGCGGGATGCATATAAAGAAATTATTAGGCGTGAGAAAGCTGAAAAAGATGCCATTGATGCAATGCGCAGGGCTAAAGCCACTGAAAACTTGTATAAAGAAGAGCTGAAACTAAGGAAAGAACTAGAGGAAGCAGCAAAGAAAGCGAATGAAGAACTTGATAATATGAAGAGCCAGACAGACAAAGTAAACGAGGAACTTCGACTTGCCTTGGATCAGAAATCATCACTAGAGAATCAAATTGCATCAACTGAACTTATGCTAAAGGAGTTGGAGCAGAAGATTGTATCAGCCGAGGATCTGTTACAAAACTACAAGGATGAACAAGATGATTTGCAAATGCAGCATGATAAGGCATTGAAAGAAGCTGAGGAGTTAAGGAGAAAACAAGGGGAGGCCTCAAGCACACACGATCTTCAACGCTTCTCAGAATTCTCCATTCCAGAGATCAAAGAAGCAACACGTAACTTCAATCCATCCCTGAAGATCGGTGAAGGTGGATATGGAAGTATATTTAACGGTATCTTGCGTCATACTGAGGTGGCTATAAAAACTTTGAAACCTGGTAGCAAACAAGGACCTGTGGAGTTTCAACAAGAGGTTGAAGTATTGAGCAAGTTAAGGCACCCCAATCTTATCACACTTATAGGAGCCTGCCCTGAATCTTGGACTCTTGTCTATGAGTTTTTACCCAATGGAAGCCTTGAAGATCGTCTCAACTGCAAGGATAGCTCACCTCCATTATCATGGCAAACTCGAATTCGCATTGCTGCAGAACTGTGTTCTGCTCTCATTTTTCTTCATTCCAGCAAACCTCACAGCATAGCGCATGGTGACTTAAAACCCTCCAACATTCTGCTTGATGCAAACCTTGTTAGCAAGCTCAGTGACTTTGGAATCTGTCGTGTGTTATCTTGTCAAGAGAGTCCTAGTAACGATACTACCCAGTTTTGGAGAACTGTTCCAAAGGGAACTCTTCTGTATGTGGATCCTGAATTCCTTACCTCTGGAGAACTTACACCAAAGTCAGATGTTTATTCATTTGGAATCATTCTGTTAAGATTGGTGACTGGGAAACCAGCCCTGGGAATAACAAAGGAAGTGCAATATGCATTAGATACAGGAAAGTTGAAATCCATCTTGGATCCTTTAGCTGGAGAATGGCCATTTATGCTAGCTGAACAGTTAACTCGCTTGGCTTTGAGGTGTTGTGAGATGAATCGAAGGAGCCGGCCAGATCTTTATCCAGATGTCTGGAAGATACTGGAACCAATGAGGGCTTCTCTTAGAGACACAAACACCTTTCAACTGGGTTCTCAAGGGCTATGCCAACCTCCTCCATATTTCATTTGTCCAATATTCCTGGAAGTCATGCAAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTAAGGCTATACGTGAATGGCTGGAAAGTGGTCATGACATTTCACCAAGGACAAATTCTAAGCTTGTACATCGCAATCTTGTTCCCAACCACTCTCTCCGCCATGCAATCCAGGACTGGCTTCAAAGCCACTGA 2667 0.4274 MAVVSPMPTTPQRINSVNSLRDIGVPGIMTNRREIVNEPSLSRVNDTIYVAVAKDVKDSKLNLIWAIQNSGGRRICILHVHVPTPMIPLMGAKFPASALSEQEVQAHHERERLNMHKTMDAYLLICQRMGVRAGKLLIEMDCIEKGIVELISYYGIKKLIMGAASDKYHSRRMTTLRSKKAIYVCEQAPAPCHIQFICNGYLIHTRDCSLDRGNVEQMAKSEVGRSPHLRSQSVTLGQNHWVKLTSPAQELFRRVRTINDGHRRSPASVSSSEGFLTPQRKFGREVSSDELDGPSRWSPSVFSMCCNSGLIEPVLTPNLISDGSENVLDLNLNGLSPISEDLHHSSPPRVLDGEMENALYDQLEQAMAEAANAKRDAYKEIIRREKAEKDAIDAMRRAKATENLYKEELKLRKELEEAAKKANEELDNMKSQTDKVNEELRLALDQKSSLENQIASTELMLKELEQKIVSAEDLLQNYKDEQDDLQMQHDKALKEAEELRRKQGEASSTHDLQRFSEFSIPEIKEATRNFNPSLKIGEGGYGSIFNGILRHTEVAIKTLKPGSKQGPVEFQQEVEVLSKLRHPNLITLIGACPESWTLVYEFLPNGSLEDRLNCKDSSPPLSWQTRIRIAAELCSALIFLHSSKPHSIAHGDLKPSNILLDANLVSKLSDFGICRVLSCQESPSNDTTQFWRTVPKGTLLYVDPEFLTSGELTPKSDVYSFGIILLRLVTGKPALGITKEVQYALDTGKLKSILDPLAGEWPFMLAEQLTRLALRCCEMNRRSRPDLYPDVWKILEPMRASLRDTNTFQLGSQGLCQPPPYFICPIFLEVMQDPHVAADGFTYEAKAIREWLESGHDISPRTNSKLVHRNLVPNHSLRHAIQDWLQSH 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6555g00002 888 SUPERFAMILY RING/U-box 814 887 - -
Mupr6555g00002 888 SUPERFAMILY Protein kinase-like (PK-like) 510 792 IPR011009 -
Mupr6555g00002 888 SMART serkin_6 530 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6555g00002 888 Pfam Protein kinase domain 534 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6555g00002 888 CDD RING-Ubox_WDSUB1-like 819 874 - -
Mupr6555g00002 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mupr6555g00002 888 ProSitePatterns Protein kinases ATP-binding region signature. 536 557 IPR017441 GO:0005524
Mupr6555g00002 888 Gene3D Phosphorylase Kinase; domain 1 508 602 - -
Mupr6555g00002 888 SMART Ubox_2 821 884 IPR003613 GO:0004842|GO:0016567
Mupr6555g00002 888 ProSiteProfiles Protein kinase domain profile. 530 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6555g00002 888 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Mupr6555g00002 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 817 888 IPR013083 -
Mupr6555g00002 888 Pfam U-box domain 819 888 IPR003613 GO:0004842|GO:0016567
Mupr6555g00002 888 CDD STK_N 47 200 - -
Mupr6555g00002 888 ProSiteProfiles U-box domain profile. 817 888 IPR003613 GO:0004842|GO:0016567
Mupr6555g00002 888 PANTHER OS02G0152300 PROTEIN 48 883 - -
Mupr6555g00002 888 Coils Coil 356 502 - -
Mupr6555g00002 888 FunFam receptor-like protein kinase FERONIA 493 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6555g00002 Mupr-Chr6555 30976 35434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6555g00002 1 888 U-box Gene Family AT2G45910 51.009 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mupr6555g00002 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6555g00002 - - gmx:100781596 1375.92