Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6550g00013 TTCGTGCCAGTCATCTTTGTGTATCATGTGCCAACATGTTGGCACTTTCTAACCTTTTATTCTGGCCTGTTAATCGCCTGCACAATTTCTTCAGGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTCGCTTTATACCGTGGTTTATATGAGTTTTCGCAATATGCCTTTAGTGGGGATGCTTTGGGGACTGATGGTATGCGCTGGGGCGATCTAAGTGATAGCACAAATGGCATGAAGGAAGTCTTAATCATCATGTTCCTGGAGTGGCTATTGGTGCTTTTTTTCGCTTATTATATCGATCAAGTTTTGTCATCAGGAAGCAGGAAAAGTCCTCTTTTTTTCTTGAAGGGATTTCAGAAAAAGTCTCATTCATCTTTTCGGAAGCCTAGTATCCAAAGGCAGAGATCTAAGGTTTTTGTCCAGATAGATAAACCTGATGTTAATCAAGAGAGGGAGAAGGTGGAACAACTGCTACTTGAACCGACTATTAATCAAGCAATTGTATGCGACAACATGAGAAAGGTCTATCCGGGGAGGGATGGTAACCCAGAGAAACTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGGGAGTGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTTACCAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTTGACATAAGAGCTCATATGGATAGAATATATACTAGTATGGGCGTATGCCCACAGCATGACTTGCTGTGGGAATCCCTGACAGGAAGAGAGCACCTACTTTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTAACACAAGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGACAAACATGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCTAGAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCAGAAGTCCTATGTGATCGATTAGGAATATTTGTAGATGGTAGCCTGCAGTGCATAGGAAATCCAAAGGAGTTGAAAGCCAGGTATGGAGGAACTTATGTCTTCACGATGACGACATCTATGGATCATGAAAAGGATGTAGAGAATTTGGTGCAGCAGCTCTCCCCAAATGCTAATAAGATCTACCATATCTCCGGTACCCAAAAGTTCGAGCTACCAAAGGATGAAGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAACTGCAAAAAGAAGCTTCACAGTTTCAGCGTGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATTAAAGTTGCACGTGGAGCTCAGGCATTTGACACCTTGTCA 1473 0.4229 FVPVIFVYHVPTCWHFLTFYSGLLIACTISSGGWIIVMELYPGFALYRGLYEFSQYAFSGDALGTDGMRWGDLSDSTNGMKEVLIIMFLEWLLVLFFAYYIDQVLSSGSRKSPLFFLKGFQKKSHSSFRKPSIQRQRSKVFVQIDKPDVNQEREKVEQLLLEPTINQAIVCDNMRKVYPGRDGNPEKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRAHMDRIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKHAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGTYVFTMTTSMDHEKDVENLVQQLSPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6550g00013 491 CDD ABC_subfamily_A 173 394 - -
Mupr6550g00013 491 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 15 118 IPR026082 GO:0016020|GO:0055085|GO:0140359
Mupr6550g00013 491 ProSitePatterns ABC transporters family signature. 308 322 IPR017871 GO:0005524|GO:0016887
Mupr6550g00013 491 FunFam ABC transporter A family member 7 158 434 - -
Mupr6550g00013 491 Pfam ABC transporter 191 335 IPR003439 GO:0005524
Mupr6550g00013 491 SMART AAA_5 199 382 IPR003593 GO:0016887
Mupr6550g00013 491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 406 IPR003439 GO:0005524
Mupr6550g00013 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 397 IPR027417 -
Mupr6550g00013 491 Gene3D - 161 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6550g00013 Mupr-Chr6550 101264 104434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6550g00013 140 417 Calmodulin-binding Proteins AT2G36910 22.867 2.76e-12 67.4