Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6546g00008 ATGGCAAGTTCAAGAGAAGGTTATCAAGCGAAGCAAGAGGGTGAGACCATTAACATTGACAAGTTCCCCAAGGCATCGTCCACTTCAAGACAATGGTCAGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTTGGAGGAAAAGATAGGCATAGCAAGGTTTGCACCATAAGAGGGTTGAGGGACAGAAGGATTAGGCTCTCAGTACCCACAGCAATTCAGCTATATGATCTTCAAGACAAGCTTGGGCTCAGCCAACCAAGCAAAGTGATAGATTGGTTGCTTGAAGCCACCAAATTTGACATTGACAAGCTCCCTCCTCTTCAATTCCCTCAGGGTTTTGCCCAATTTCATCATCAACAAACCCTACTCCCCTTTCATGGATCAAGTGCCTCTCAGCTTTCTCTTGGTCCCTTCTGTGATGCTAGCTCCACATTAAGGGATGGGGGGATTCAAAACCTCATGACAAAGTCAAGGTATTGGGATAATATGGATTCAATATCAAGATTGAAAGGCAAGGAAGCTGAAAAGGGCAAGTGGATCAAAACACATGAGCAAGAAAATCAAGATGATGTTGTTGGAGGTTACAACAGCTTGCAAGTTTCTACTCAGAGGCTTTTCCCAATGGGTAGTAGTAACACCACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATACCATGTCATATAACTCCTACAATTCTGAGCCTTCTAGTTTGTCTTTATCCCAATTTGGAAGCAATGGCTTGTTTCCTTCCCAGCAGGTAGATCCCAATCCAAGCACTGGCAATGGTGTGCAATACCCATCATCTGGTTCTCAATTATTGTTTGGTTCATCTTCTGCTACCCCATCAATTTTCACTACCTATGCTCCATTTATGACACCCTCACTGGACAATGATCCTAGGCAGTTCAACCACATTCAGTTCATGAACCCAGGTTCCCAAATCTTGCCTCATCCTCTCATTCCATCTCTTCACTCATTCAATTCACATGTCAGACCCTTCCCAGCACCACCCTTTAGTTCAAAGCTTTTGGATTCAGATAACAACCGTGGCCAACAAGATAAGGCTACACTTACCTTATTGACAAACCATTCTGGGTACAAGTGCTTTATTGGAGGGACAGGGAAGGAAATAGGAAATGGGAGATATTGT 1164 0.4347 MASSREGYQAKQEGETINIDKFPKASSTSRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGFAQFHHQQTLLPFHGSSASQLSLGPFCDASSTLRDGGIQNLMTKSRYWDNMDSISRLKGKEAEKGKWIKTHEQENQDDVVGGYNSLQVSTQRLFPMGSSNTTTHSLLPGLLNNTMSYNSYNSEPSSLSLSQFGSNGLFPSQQVDPNPSTGNGVQYPSSGSQLLFGSSSATPSIFTTYAPFMTPSLDNDPRQFNHIQFMNPGSQILPHPLIPSLHSFNSHVRPFPAPPFSSKLLDSDNNRGQQDKATLTLLTNHSGYKCFIGGTGKEIGNGRYC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6546g00008 388 MobiDBLite consensus disorder prediction 246 269 - -
Mupr6546g00008 388 Pfam TCP family transcription factor 49 160 IPR017887 -
Mupr6546g00008 388 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Mupr6546g00008 388 MobiDBLite consensus disorder prediction 1 20 - -
Mupr6546g00008 388 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 279 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6546g00008 Mupr-Chr6546 44101 45917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6546g00008 33 299 TCP Transcription Factor Family AT5G60970 46.403 7.83e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr6546g00008 TCP 3.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6546g00008 - - gmx:100788984 571.237