Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6545g00002 ATGAAGTGTTTGGATCAAGACGAAACATGGAGGATCTCCAGTTTAGTATCTGAGAGGGAAGTTCATTGGGTTTGTTTAGATCTCACAAGTGGTTCTAGGATTCCTGAGGAGCATGCCTCCTTTCCTACACATAAAAAAAGGTGGGAAATGGAGATCCTCCCTCCTGAGTCACCTTATGTTTACAACTCGAATTGGCTTGTGGATGATAACAGGAACAGCACCAAATGGACCCCTGCAGAGAACAAGCTCTTTGAGAATGCTCTTGCAGTGTATGATAAGGACACCCCGGATCGGTGGCACAAGGTGGCTGAGATGATCCCAGGAAAGACAGTTATGGATGTGGTGAAGCAGTACAAGGAGTTGGAAGCAGATGTTTGCAACATAGAAGCTGGTTTGATCCCAATTCCAGGCTACAGCACCACCTCACCCTTCACCTTAGACTGGGTCAACACTCCACCCTATGATGGCTTCAAAGGACTCACTGCCAAGAGATCCTCCTCGGCCAGACCTCCTGATCAGGAAAGGAAGAAAGGTGTGCCATGGACCGAAGAGGAACACAAGTTGTTCCTACTGGGGCTGAAGAAGTATGGCAAAGGTGATTGGAGGAACATATCACGCAATTTTGTGATTACTCGAACACCAACACAGGTGGCTAGCCATGCTCAAAAATACTTCATCAGGCAACTTTCAGGAGGCAAAGACAAGAGGAGGGCTAGCATCCATGACATAACAACAGTTAACCTCACAGAAACCACTAGAACTTCTTCTTCACAAGATAAGAGATCCACTTCGCCACCGGCGATGCTCTCACACCAGCAGCCTAATTCTAGCACCGCCACCTCATCCAGAGTGAATTTTCAGTGGGGTAATCAGCCAAATGCAGGAATGGCTATGCCTCTCAATCCTGCACATGAGCAAGTATTCATGTCCCCTTATGGCCTTAACTCTTATGGGTTTAAGGTGCAGGGCCAAAACCTTCACAGAAGTCCTTCTTACTTAGGACCTCAGGCACAAAACATGGTTTTCCAAATGCAACCCTCCCAACACTATTCCCATGCTTGA 1062 0.4718 MKCLDQDETWRISSLVSEREVHWVCLDLTSGSRIPEEHASFPTHKKRWEMEILPPESPYVYNSNWLVDDNRNSTKWTPAENKLFENALAVYDKDTPDRWHKVAEMIPGKTVMDVVKQYKELEADVCNIEAGLIPIPGYSTTSPFTLDWVNTPPYDGFKGLTAKRSSSARPPDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSSSQDKRSTSPPAMLSHQQPNSSTATSSRVNFQWGNQPNAGMAMPLNPAHEQVFMSPYGLNSYGFKVQGQNLHRSPSYLGPQAQNMVFQMQPSQHYSHA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6545g00002 353 SUPERFAMILY Homeodomain-like 74 129 IPR009057 -
Mupr6545g00002 353 FunFam transcription factor MYB1R1 179 230 - -
Mupr6545g00002 353 Pfam Myb-like DNA-binding domain 180 225 IPR001005 -
Mupr6545g00002 353 Gene3D - 68 135 - -
Mupr6545g00002 353 MobiDBLite consensus disorder prediction 161 180 - -
Mupr6545g00002 353 ProSiteProfiles Myb-like domain profile. 68 122 IPR001005 -
Mupr6545g00002 353 SMART sant 72 124 IPR001005 -
Mupr6545g00002 353 SMART sant 177 227 IPR001005 -
Mupr6545g00002 353 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 69 323 IPR043363 -
Mupr6545g00002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 229 IPR017930 -
Mupr6545g00002 353 ProSiteProfiles SANT domain profile. 181 229 IPR017884 -
Mupr6545g00002 353 ProSiteProfiles Myb-like domain profile. 173 225 IPR001005 -
Mupr6545g00002 353 SUPERFAMILY Homeodomain-like 175 228 IPR009057 -
Mupr6545g00002 353 CDD SANT 75 121 IPR001005 -
Mupr6545g00002 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 176 228 IPR006447 GO:0003677
Mupr6545g00002 353 FunFam Transcription factor SRM1 68 135 - -
Mupr6545g00002 353 MobiDBLite consensus disorder prediction 245 282 - -
Mupr6545g00002 353 Gene3D - 179 229 - -
Mupr6545g00002 353 CDD SANT 180 225 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6545g00002 Mupr-Chr6545 17465 20017 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6545g00002 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6545g00002 - - gmx:100784163 536.954