Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6533g00005 ATGCCAACTGTGTGGTTCTCTCTCAAGAGGTCTCTACACTGCAAATCAGAGGCATCAGATGTTCATGACCCCAAAACAAGGAAGCAGTTGAGCACAATCTTGACCAAAAAGGGAGGGTCAGGGAGGTCAGGTTGTTCCAGGTCCATTGCAAATCTTAAAGATGTTATCCATGGGAGCAAGAGGCATCTAGAGAAGCCACCAAGTTGCAGCCCAAGATCCATAGGAAGCAGTGAGTTTCTCAACCCAATAACCCATGAAGTGATCTTGAGCAACTCAAGGTGTGAGCTGAAAATCACTGGCTATGGAGGAGGGTTCCAAGAAGGGGTTGGCAGTGATGGTGGAGGTGCCATAAGTACTGATTTGAGTACCTTTGTGGGCACTTTAAGGCCTGGGACTCCTGGCCCTGGAGGGCACCCCACAATGCACTATTTCAACCCTTCTTTTAGGACTTCATCCACTCCTCCAAGGAAATCTCCTTTCCTTTCATCAGATAAAGAAGGGCCTGGTTTGCATGGTGTTGGAGTTGGACCTCATTCAAGCACCAGGGTTCCACTTGAGACAGATTCAAATGTGTCTTCCACTCTCACTTGCCACAAATGTGGAGAGCAATTTAACAAATGGGATGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTAGTGGAAGGCGATTCATCAAGAAAAATAGTGGAGATAATATGCAGGACGAGTTGGTTAAAGTCTGAAAACCAATGTGGACGAATTGAGAGAGTTTTGAAAGTGCACAACATGCAAAGGACTCTGGCTAGGTTTGAAGAGTATAGGGAGTTGGTGAAAATCAAAGCTAGTAAACTCCCCAAGAAGCATCCACGGTGTCTTGCTGATGGGAATGAGCTTTTGAGGTTCTATGGCACCACTGTTGCATGCTCTCTTGGTCTCAATGGCTCTTCCAGCCTGTGCTTGTCTGAAAAGTGTTGTGTTTGTAGAATCATCAGAAATGGGTTTTCTGCCAAGGAGGAGCTCAAGGGTGGAATAGGTGTTTTCACTACTTCTACCAGTGGAAGAGCTTTTGAATCTATTGAGGTTTTTGACCATGACCCTTCATTGAGAAAAGCACTTATAGTCTGCAGAGTCATTGCTGGCAGGGTCCATAGACCTCTGGAGAACATTCAGGAAATGGCAGGTCAAACAGGCTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTACTTGCTCAATCCTAGAGCACTTCTTCCTTGCTTTGTGACTTGGGTTGCGATAGAAAATAGTGAAGAACTAGCCCGTCAAAGACCAATGGCTAAAACTAGTTACCATCATCTTCTGGTTGGAGTAATTGCCGCAGATCACGCTGGAAAATTTTGGGACCTGGCCTTTGCTATCGACAAT 1413 0.4544 MPTVWFSLKRSLHCKSEASDVHDPKTRKQLSTILTKKGGSGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGGFQEGVGSDGGGAISTDLSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLSSDKEGPGLHGVGVGPHSSTRVPLETDSNVSSTLTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQRTLARFEEYRELVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKEELKGGIGVFTTSTSGRAFESIEVFDHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVTWVAIENSEELARQRPMAKTSYHHLLVGVIAADHAGKFWDLAFAIDN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6533g00005 471 MobiDBLite consensus disorder prediction 144 159 - -
Mupr6533g00005 471 FunFam C2H2-like zinc finger protein 219 428 - -
Mupr6533g00005 471 MobiDBLite consensus disorder prediction 131 187 - -
Mupr6533g00005 471 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 425 - -
Mupr6533g00005 471 Gene3D - 209 428 - -
Mupr6533g00005 471 SUPERFAMILY ADP-ribosylation 220 425 - -
Mupr6533g00005 471 ProSitePatterns Zinc finger C2H2 type domain signature. 197 218 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6533g00005 Mupr-Chr6533 61501 64898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6533g00005 1 425 C2H2 Transcription Factor Family AT5G54630 67.028 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6533g00005 None None None