Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr652g00003 ATGGCGACGGCGGCGGAGCCGAAGACGTACTGGTGCCACGAATGCGACATGAGCGTGTCCCTGGCCCTTCCTCCCTCCCCTCTCCTCTGCCCCCACTGCCACACCCACTTCCTCGAACTCATGGATTCGCCCTCCTTCCAAAACGACGCCGAATCCCCCCTCTTCGACGTCGTTTTCCAAGACGCGCTCTTGCTACTCTCCCCCAAGCCTCCTGTCCCCTCCAAACCCCGTTCCCTCCCGTCAGTCCCCGTTACCCCCTCTTTGCTCTCCGACCTCGACCCAAACGGCGTCGTCCTCTGCGCCGTTTGCAAAGACCAAATTACCCTCGACGCCGATGCCAAACAGTTACCCTGCAAACACCTTTACCACGCCGACTGCATCACGCCGTGGCTCGACCTCCACGCCTCTTGCCCCCTCTGCAGGTTCCGCTTGGAGGAAGAGGACGACCACCAAGACGCTGACGGCGTCATGACGGAGATCAGGAGGGAGCTCATCGCCAGGCTCACGGAGTTCACCGAGGAGGATTTCTACGGACTCAGGACCACTCTCAACCACATTGCGTCGCGCCACGCGCTCATCGAAGAGAACGAGAATCGCGCGCAAATCGCTCAACCTCGCGGCGCCGAATCTCCTTGCTGA 639 0.6135 MATAAEPKTYWCHECDMSVSLALPPSPLLCPHCHTHFLELMDSPSFQNDAESPLFDVVFQDALLLLSPKPPVPSKPRSLPSVPVTPSLLSDLDPNGVVLCAVCKDQITLDADAKQLPCKHLYHADCITPWLDLHASCPLCRFRLEEEDDHQDADGVMTEIRRELIARLTEFTEEDFYGLRTTLNHIASRHALIEENENRAQIAQPRGAESPC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr652g00003 212 Pfam Ring finger domain 100 141 IPR001841 -
Mupr652g00003 212 ProSiteProfiles Zinc finger RING-type profile. 100 141 IPR001841 -
Mupr652g00003 212 Pfam zinc-ribbon 9 41 IPR039525 GO:0061630
Mupr652g00003 212 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 56 144 - -
Mupr652g00003 212 SMART ring_2 100 140 IPR001841 -
Mupr652g00003 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 159 IPR013083 -
Mupr652g00003 212 SUPERFAMILY RING/U-box 99 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr652g00003 Mupr-Chr652 21356 21994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr652g00003 6 61 C3H Transcription Factor Family AT3G60080 48.387 5.15e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr652g00003 K11982 - gmx:100782164 313.153