Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6526g00001 ATGAAGCGTCTCATGGTCTACGAACTTCACGAAGGGTCTTTCCTCGGTGTAGGTCTCTATTCCTATGTGTCGGAAGCAAGGCGAGGCTCCCCATCCTGTTGTGTTGTCTTTCTTTCTGTATTGCAAACATTGGATGCTTCCTCTTTAGACGAGGAAGAGGAGAATGAGCGAGCCTTGGCCAGAAATGGATCTCTTATTTATAAGGCACAAGCACTACCCACCAAAACTTCATTCAGATTAGAAAGTGAGAGTTTGGATCCTCAGAAACAGATTGAGATTGCAGAGAGAGATAGAGAGATGGGAAGAGCTCCATGTTGTGACAAGGCAAGTGTTAAGAAAGGGCCATGGTCACCAGAAGAAGACAAAAAGCTGAAGGAGTACATAGAGAAGCATGGAACTGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTTAAGAGATGTGGGAAAAGTTGCAGATTGAGATGGCTCAACTATCTCAGGCCCAACATTAAGCATGGAGATTTCTCCGATGAGGAAGACAGGATAATTTGCAGCCTCTTTGTTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAGTTACCTGGAAGGACAGACAATGACATCAAGAACTATTGGAACACCAAGTTGAAGAAAAAACTCATGGGGTTGCTTCCTCTTTCTCATCACAGAAAACAACCTTCATTTCAATCCTCTTCCCTTCAAAACCCTCCACCCTCTCCTTCATCTCACCAACTGTACGGAGAGTACTGCACCTACACCCCAATGACACCCTCATCTTTCACAGGCATGCAGCCCCTTTCCCTTCCTTCAAGTAACTATGCAACCACAAGTAGCACAACAACAACCTCAGTTTCTCACCCCTTTTACCAAAGCCAAGACTCCATGGCTAGCATGCAATGCTATTACCCTATGAGAGACAGCATGGTCATGTTTGGAAGCGAAGGAAGTTGCAGTTCCTCTGATGGAAGCTGCACTCATGGAAGAGAGATCAAACAAGAAGAAACCGGTTTCCACAGTTACAATGATAACCTTATGCTTAGTTACAACAACATTAGCCAAACTTTAACACCGTTGGATTATGATATGGAGGACATTAAGCAATTGATTAGTAGCAGCTTTAATAATGTTGATGAAAACAAGACAGAAGAAGAGAAGGCCATGTACTACTACTACTAG 1185 0.4371 MKRLMVYELHEGSFLGVGLYSYVSEARRGSPSCCVVFLSVLQTLDASSLDEEEENERALARNGSLIYKAQALPTKTSFRLESESLDPQKQIEIAERDREMGRAPCCDKASVKKGPWSPEEDKKLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLFVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPLSHHRKQPSFQSSSLQNPPPSPSSHQLYGEYCTYTPMTPSSFTGMQPLSLPSSNYATTSSTTTTSVSHPFYQSQDSMASMQCYYPMRDSMVMFGSEGSCSSSDGSCTHGREIKQEETGFHSYNDNLMLSYNNISQTLTPLDYDMEDIKQLISSSFNNVDENKTEEEKAMYYYY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6526g00001 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 161 IPR017930 -
Mupr6526g00001 394 ProSiteProfiles Myb-like domain profile. 108 161 IPR001005 -
Mupr6526g00001 394 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Mupr6526g00001 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 216 IPR017930 -
Mupr6526g00001 394 CDD SANT 115 161 IPR001005 -
Mupr6526g00001 394 Pfam Myb-like DNA-binding domain 113 161 IPR001005 -
Mupr6526g00001 394 Pfam Myb-like DNA-binding domain 168 210 IPR001005 -
Mupr6526g00001 394 Gene3D - 169 238 - -
Mupr6526g00001 394 SMART sant 166 214 IPR001005 -
Mupr6526g00001 394 SMART sant 112 163 IPR001005 -
Mupr6526g00001 394 PANTHER OS09G0431300 PROTEIN 100 366 - -
Mupr6526g00001 394 FunFam Transcription factor MYB36 169 238 - -
Mupr6526g00001 394 FunFam Transcription factor RAX3 106 167 - -
Mupr6526g00001 394 SUPERFAMILY Homeodomain-like 110 208 IPR009057 -
Mupr6526g00001 394 Gene3D - 106 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6526g00001 Mupr-Chr6526 6914 9417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6526g00001 100 218 MYB Transcription Factor Family AT5G57620 89.076 9.26e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6526g00001 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6526g00001 K09422 - gmx:100779919 447.203