Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr650g00001 ATGGCGGCCGTCAGAAAAATAATTGAGGCCAACAAAATCTTGTCTCCGTCTCTTCTCTCTTCTCGCCGAGGAATCGCTTACAAGCTTTTTGTTGGAGGACTGTCCTTCTACACCACAGAGAAAGCATTATCAGATGCGTTCTCCAATTACGGGCAAGTTGTTGAAGCTAAAATTGTAACAGATAGGGTGTCAGACAGATCTAAGGGATTTGGGTTTGTCACCTTTGCTTCTCAAGACGAGGCTGAGAATGCCATAGCAGAGATGAAAGGAAAGACATTAAATGGGCGTGTTGTCTTTGTTGATTATGCAAAACCCAATATCAACACTGGTGGTGGAATGCCAATTGCTAGAGGACCTCCTGAACCAACAGCAGATACTTAG 381 0.4409 MAAVRKIIEANKILSPSLLSSRRGIAYKLFVGGLSFYTTEKALSDAFSNYGQVVEAKIVTDRVSDRSKGFGFVTFASQDEAENAIAEMKGKTLNGRVVFVDYAKPNINTGGGMPIARGPPEPTADT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr650g00001 126 Gene3D - 20 121 IPR012677 -
Mupr650g00001 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 97 IPR000504 GO:0003723
Mupr650g00001 126 SUPERFAMILY RNA-binding domain, RBD 27 118 IPR035979 GO:0003676
Mupr650g00001 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 105 IPR000504 GO:0003723
Mupr650g00001 126 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 24 113 - -
Mupr650g00001 126 SMART rrm1_1 28 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr650g00001 Mupr-Chr650 1254 2486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr650g00001 29 104 Eukaryotic Initiation Factors Gene Family AT2G23350 34.211 2.31e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr650g00001 - - gmx:100527079 218.779