Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6509g00004 ATGGGGGATTCTGGTTCGGCACCAAAATCTCTTATGGAGAACCTTCTTGGCCTTCTCAGGGTTCGCATCAAGCGCGGCGTCAACCTCGCCATTCGTGATGTCCGAAGCAGCGACCCTTACGTTGTCATCAAGATGCAAAACCAGAAACTAAAGACTCGCGTGATTAAAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACCCTTTCTGTTATAAATCCGAATCACCCAGTTAAACTGACCGTGTTTGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACATCTTGCCCTTTATAGAAGCCTTGAAGATGAACTTAACTGGCCTTCCAAGTGGTACTAAAATCGCAAGAATACAACCTAGCAGGCAAAACTGCCTGGCAGACGAGAGCTGCATCACTTATAGCAACGGCAAGGTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATCCAATTGCAGTGGATTGATCTTCCTGGTTCTAAAGTGTGTTTTGGAAGGGATAGAGGCATTGATTTGGTCCCATACGCCATATATGAAATCTGCATGATGAAAAGAATAATATCTGTATATTTCCATTCTGGATCAACCAGTAAAACTTTGTAG 642 0.4283 MGDSGSAPKSLMENLLGLLRVRIKRGVNLAIRDVRSSDPYVVIKMQNQKLKTRVIKKDVNPEWNEDLTLSVINPNHPVKLTVFDHDTFSKDDKMGDAEFDILPFIEALKMNLTGLPSGTKIARIQPSRQNCLADESCITYSNGKVVQDMILRLQNVECGEVEIQLQWIDLPGSKVCFGRDRGIDLVPYAIYEICMMKRIISVYFHSGSTSKTL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6509g00004 213 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 174 IPR044562 -
Mupr6509g00004 213 Pfam C2 domain 17 101 IPR000008 -
Mupr6509g00004 213 Gene3D C2 domain 13 175 IPR035892 -
Mupr6509g00004 213 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Mupr6509g00004 213 SMART C2_3c 18 113 IPR000008 -
Mupr6509g00004 213 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Mupr6509g00004 213 CDD C2_ArfGAP 16 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6509g00004 Mupr-Chr6509 43888 46094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6509g00004 49 188 C2H2 Transcription Factor Family AT1G70790 59.859 1.08e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6509g00004 - - gmx:100810504 323.168