Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6504g00002 ATGGAGAATAGTGAGGAGTACAAGCATTACTGGGAGACCAACATGTTTTTCCAAGCTGAAGAGCTTGGCAGCTGGGCAAAGGATGAGGGTTTGTCTGGGTACTATGATTCAAGCTCCCCGGACGGTGGCGCTTCATCGATGGCATCGAAGAACATTGTCTCGGAGAGGAATAGGAGGAAGAAGCTGAACGAAAGGCTTTTTGCACTTAGAGCGGTGGTCCCCAACATTAGCAAGATGGATAAGGCTTCTATCATTAAGGATGCAATTGAGTACATCCAGCACTTGCATGACCAAGAGAAGAGAATCCAAGCAGAGATTTTGGATCTTGAATCTGGGAAGCTCAAAAACCCAATCTATGAATTTGACCAGGACCTGCCTATTTTGCTCAGGTCTAAGAAGAAGAGAACAGAACACCTTCTTGATTCTGCCACTTCAAGAAATTCCCCAATTGAAATAATTGAGGTATAA 468 0.4444 MENSEEYKHYWETNMFFQAEELGSWAKDEGLSGYYDSSSPDGGASSMASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQHLHDQEKRIQAEILDLESGKLKNPIYEFDQDLPILLRSKKKRTEHLLDSATSRNSPIEIIEV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6504g00002 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 39 149 - -
Mupr6504g00002 155 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Mupr6504g00002 155 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 110 IPR036638 GO:0046983
Mupr6504g00002 155 Gene3D - 44 112 IPR036638 GO:0046983
Mupr6504g00002 155 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 114 - -
Mupr6504g00002 155 MobiDBLite consensus disorder prediction 38 52 - -
Mupr6504g00002 155 SMART finulus 52 101 IPR011598 GO:0046983
Mupr6504g00002 155 MobiDBLite consensus disorder prediction 36 56 - -
Mupr6504g00002 155 Pfam Helix-loop-helix DNA-binding domain 53 96 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6504g00002 Mupr-Chr6504 6224 7082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6504g00002 5 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.774 2.79e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6504g00002 HLH 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6504g00002 - - gmx:100817061 224.942