Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6503g00003 ATGAGTGCTGAGGAAAAACATGATCCACCTTCGCGCAAACCAACACTTTCTCTTCCACTTCACAAGGTGGATGATCCAATGAGTGTAACCGATGAAACCTCGCATGTTAATCATTGGAAGCGAGAGAGTCTTGTTCACCTGGAAATACCCTCCAGAACATCAGAAGTGTCTTCTCAGGATTTTGTAGCAATAAGGATGCCACTCACACCAAGTCCAACTCCTAGTCATAAGAAAGTCAATTTTCTTGTGACTTCTCGCTCTGTTGATGCTCCAAGGCCTTCAGCTTCCAGAGGCAAATCATCCATGAGAAGCATATTACCAAAATTGGGCTTCAGGAATCGGGCATCCCTTGATGTTGAAAAGCCTGTTACTGCACCTCCAGAAGGTTCCTTTTCTGGCCACCAAGATAAGTCTTCAATCTCGAGATCAGTCTCTCTCACCAAGATATTTACCACCAAGATTAAGCGAACATCATCCTTACCGGTGGAAGAAATTGCGCGTGCAAATACTGAATCTGCTCTGGATGCTTCTCCGTGTAGAAGAGAGATCCAGGGGATGATAGCTCGTTCTCGTTCAGTACCTGTGAATAACAAAGAAAAAGGCATAAGAAAGTTGGATTCAGTTTTCCGCATTATTCCTTCCACCCCTCGCGTAAATGAAGTGAATGAAACAACAAAGGATACTGAACAGATGCTTCCAAACCTACATGCACTTACTAACTTGAAAGCCTTTGTTGGGTCAGAAAATGGTGATGGTGAAGATATTGGTGAAGAGGAAGCGGTGTGTAGAATTTGTCTGGTTGATCTGTGTGAAGGAGGTGAGACATTAAAGATGGAATGCAGCTGCAAAGGAGAACTTGCTCTGGCTCACCAAGAATGTGCTGTTAAATGGTTCAGTATCAAGGGTAACAAGACCTGTGATGTGTGCAAGGAGGAGGTTCGGAACCTCCCTGTCACTCTCTTACGGATCCGAAGTGTTCAAACTCAAAATACTGGAGCAAGGTCCGAGCAGGGAGATGAATACAGGCATAACCATACTAAATCAACATGTATTCTTCTTGTGTCTTTCTTGTACTACAAATTACTGTTACATAGAACACTTGTTAATTTGTCTGCTGAATTTGACAGGGTTTGGCAGGAACTCCCAGTGCTTGTGATTGTCAGCATGCTTGCCTATTTCTGTTTCCTTGAGCAGCTGTTGGTTGGGAAAATGGGAACCAAGGCAATTTTCGTCTCTCTTCCATTTGCCTGTGCACTGGGTCTACTCTCCTCCATAACATCATCAACCATGGTGAACAGCAGGTTCATCTGGATTTATGCTTCTGCCCAATTTATTTTGGTGGTCATATTCGCCCATATATTTTACCCCTTGGTTGGTAAGCATGCGGTTTTGTCGATCCTTCTTGCAACATTTGCTGGGTTTGGTGTGGTGATGAGTGGAAGTTCAATTATTTTGGAGTCTTCTAGATGGAGAAGAAGATGGCAAGCTTTATCAGAGCAGCAGCGTGCTTCTTCTGCGATGACACTATCAAATCAGAGCTGA 1542 0.4377 MSAEEKHDPPSRKPTLSLPLHKVDDPMSVTDETSHVNHWKRESLVHLEIPSRTSEVSSQDFVAIRMPLTPSPTPSHKKVNFLVTSRSVDAPRPSASRGKSSMRSILPKLGFRNRASLDVEKPVTAPPEGSFSGHQDKSSISRSVSLTKIFTTKIKRTSSLPVEEIARANTESALDASPCRREIQGMIARSRSVPVNNKEKGIRKLDSVFRIIPSTPRVNEVNETTKDTEQMLPNLHALTNLKAFVGSENGDGEDIGEEEAVCRICLVDLCEGGETLKMECSCKGELALAHQECAVKWFSIKGNKTCDVCKEEVRNLPVTLLRIRSVQTQNTGARSEQGDEYRHNHTKSTCILLVSFLYYKLLLHRTLVNLSAEFDRVWQELPVLVIVSMLAYFCFLEQLLVGKMGTKAIFVSLPFACALGLLSSITSSTMVNSRFIWIYASAQFILVVIFAHIFYPLVGKHAVLSILLATFAGFGVVMSGSSIILESSRWRRRWQALSEQQRASSAMTLSNQS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6503g00003 513 SMART ringv_2 261 310 IPR011016 GO:0008270
Mupr6503g00003 513 Pfam RING-variant domain 262 309 IPR011016 GO:0008270
Mupr6503g00003 513 PANTHER OS02G0165000 PROTEIN 22 507 - -
Mupr6503g00003 513 SUPERFAMILY RING/U-box 258 313 - -
Mupr6503g00003 513 CDD RING_CH-C4HC3_MARCH 262 310 - -
Mupr6503g00003 513 ProSiteProfiles Zinc finger RING-CH-type profile. 254 316 IPR011016 GO:0008270
Mupr6503g00003 513 MobiDBLite consensus disorder prediction 117 138 - -
Mupr6503g00003 513 MobiDBLite consensus disorder prediction 1 35 - -
Mupr6503g00003 513 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 317 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6503g00003 Mupr-Chr6503 21045 24776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6503g00003 259 316 C3H Transcription Factor Family AT2G37950 47.458 3.99e-13 66.6