Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6503g00002 ATGGGGAATATCGGAAGCAGGAGGAGGAGGCGGCGCCACCGCACTCCGGAGGTTCCGCAACCACAAGGGACTAACACAAACTACTACTCCTTTGCTGCACCACCCCCTCAGCACTACCCCAACACCATTCTTCCTCCTTATCGGCACTTTCCCCGATCCTTTCCTCCACCACCTTCCCTTCAGCTTCACCACCACAAAGCTGTCACTATCAGGAATGATGTCAATATCAAGAAGGACACTCTTTGCATCCACCCTGATCAACACAATCCTCACCATTTTCTTCTCACTTTCACCTTTGATGCCACTGCTCCTGGATGCATTACGGAAACTTTAGATGGTAAGCTGATAGCCGTAAAGAAAAGCTTGCTGAAACAAATCTCAATGCCTTTTCAGGAAGGTCTTTGTCAGAAATTCAGACAACCTTCTGGAACTGGCATTGAAATCTCAATGTTAGAGGAGACAGGACTAAGCAAAGAAGGTGATGCAGAAGTTTATCCCCTTGTGCTGAAGGCTGAGGCTCGACCATTAAACCGTTATGAAAACGAGGGAAACCCATCTTCTCAAATTACTTTGGCTAGTTTTGAGAAGAGAGAGAGGGGTGAGTACAAGGTCAAAGTAATGAAACAGGTTCTCTGGGTCAACGGGAAGAGGTATGAACTGCAAGAGATATATGGAATTGGGATTGCTAGTGATGGTGATAGCCATGAATCTGGTGGAGATTGTGTAATTTGTTTGTCAGAGCCACGAGACATAACTGTACTCCCTTGCCGACACATGTGCATGTGCAGTGGCTGTGCCAATCTTCTGAAAGTTCATACAGCCAACTGCCCCATCTGTAGGCATCCAATTGAGAGGCTTTTGCAAATTACAAATCCTTTGCTTAGTAATGCAGAAAGGAGCTTGAATTTTATTGTTTAA 918 0.4564 MGNIGSRRRRRRHRTPEVPQPQGTNTNYYSFAAPPPQHYPNTILPPYRHFPRSFPPPPSLQLHHHKAVTIRNDVNIKKDTLCIHPDQHNPHHFLLTFTFDATAPGCITETLDGKLIAVKKSLLKQISMPFQEGLCQKFRQPSGTGIEISMLEETGLSKEGDAEVYPLVLKAEARPLNRYENEGNPSSQITLASFEKRERGEYKVKVMKQVLWVNGKRYELQEIYGIGIASDGDSHESGGDCVICLSEPRDITVLPCRHMCMCSGCANLLKVHTANCPICRHPIERLLQITNPLLSNAERSLNFIV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6503g00002 305 SUPERFAMILY RING/U-box 240 288 - -
Mupr6503g00002 305 MobiDBLite consensus disorder prediction 1 15 - -
Mupr6503g00002 305 ProSiteProfiles Zinc finger RING-type profile. 241 280 IPR001841 -
Mupr6503g00002 305 PANTHER MAHOGUNIN 1 291 IPR045194 GO:0061630
Mupr6503g00002 305 SMART ring_2 241 279 IPR001841 -
Mupr6503g00002 305 Pfam Zinc finger, C3HC4 type (RING finger) 240 285 - -
Mupr6503g00002 305 MobiDBLite consensus disorder prediction 1 30 - -
Mupr6503g00002 305 FunFam probable E3 ubiquitin-protein ligase LOG2 226 290 - -
Mupr6503g00002 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 290 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6503g00002 Mupr-Chr6503 6555 8823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6503g00002 58 260 C3H Transcription Factor Family AT3G09770 51.364 7.84e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6503g00002 - - gmx:100816136 461.455