Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6499g00005 ATGCAGGAGCATCAAGAGGAATTAAGGAACATGCAAATCATGAAGGGCAAGCGCACAAAACGTCAAAGACTTCCATCCCCACTTAGGTTAACCATGTCAACGTGTTCTTCCAGTTTAGGAAGAAGCAGCACCGACAATTCCGTGGGTTTTGATGTCCCTACAACCTCAAATGAATTAAGGAACAACGGAACTGAAGAAGAGGACATGGCCAATTGTTTGATTCTCTTAGCTCGAGGCCGTAATAACACCCCAAAGTCACGACCTGATCATCATCACAACAAAGGAGGAGGTGGAGGGGTATACCTTTATGAGTGCAAGACTTGTAACCGATGTTTCCCTTCGTTTCAAGCCCTCGGTGGTCACCGAGCCAGCCACAAGAAATATTCCAAGGCAAATACGGAAGAAAAGCAAGGAGTAGTTACTACTTTTGTGAATGAAGTGGATCATAAGCATGACGGTTATTGTGACCCCACAAGCACCACCCTCACCTTACAATTATCAACGGCTTTGTACAATAGCAACGGCACTACTAGGCCTTTTAATGCTAAATCTAAAGTTCACGAGTGTTCCATATGTGGGGCAGAGTTCACATCTGGGCAAGCCTTGGGGGGACACATGAGGAGGCATAGAAACACACCTACCAGTGGGGCAATTGCAAATGGTCGTGATGAGACTCATGAAATTCCAGAAACCAAGAAACACAAAGATGTTTTGAACTTGGACTTGAATCTTCCGGCACCTGAGGATGATCACAGAGATTCCAAGTTGTTTCCTTTTCAGTCCAAAGAAAACATAAACCAGCGTCATGCACGTGAGAAAATTGAAAGAGAATAG 834 0.446 MQEHQEELRNMQIMKGKRTKRQRLPSPLRLTMSTCSSSLGRSSTDNSVGFDVPTTSNELRNNGTEEEDMANCLILLARGRNNTPKSRPDHHHNKGGGGGVYLYECKTCNRCFPSFQALGGHRASHKKYSKANTEEKQGVVTTFVNEVDHKHDGYCDPTSTTLTLQLSTALYNSNGTTRPFNAKSKVHECSICGAEFTSGQALGGHMRRHRNTPTSGAIANGRDETHEIPETKKHKDVLNLDLNLPAPEDDHRDSKLFPFQSKENINQRHAREKIERE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6499g00005 277 MobiDBLite consensus disorder prediction 243 277 - -
Mupr6499g00005 277 MobiDBLite consensus disorder prediction 26 60 - -
Mupr6499g00005 277 Pfam C2H2-type zinc finger 103 127 - -
Mupr6499g00005 277 Pfam C2H2-type zinc finger 186 210 - -
Mupr6499g00005 277 SUPERFAMILY beta-beta-alpha zinc fingers 102 209 IPR036236 -
Mupr6499g00005 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 187 214 IPR013087 -
Mupr6499g00005 277 MobiDBLite consensus disorder prediction 243 258 - -
Mupr6499g00005 277 ProSitePatterns Zinc finger C2H2 type domain signature. 189 209 IPR013087 -
Mupr6499g00005 277 PANTHER ZINC FINGER PROTEIN ZAT5 55 257 - -
Mupr6499g00005 277 Gene3D Classic Zinc Finger 100 209 - -
Mupr6499g00005 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Mupr6499g00005 277 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Mupr6499g00005 277 SMART c2h2final6 187 209 IPR013087 -
Mupr6499g00005 277 SMART c2h2final6 103 125 IPR013087 -
Mupr6499g00005 277 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6499g00005 Mupr-Chr6499 48277 49407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6499g00005 13 277 C2H2 Transcription Factor Family AT5G04390 36.812 3.99e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6499g00005 zf-C2H2_6 2.3e-12 CL0361