Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6497g00005 ATGTCTGGAGAGGAAATCTGGCCATCCAATGAAGAATATAATAAATCTCTTCCTCCATTTGGTAACAGGAGTGGCTACAATTCAAGAACAGGCATCTATCACTCTCTAGTTAAGCTTGGCACCAAGCATGAAATCCCAATAAAGCCTGACCTTAACACTGCCAATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTGCTGAGGCAAAAATTGCATTCATTGATTCAGGTACCAAAAGGAGTGTAAGCTATGATGAGCTAAGAAGGTCTACTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGTGATGTGGTATTTCTATTGTCACCAAACTCAATCTTGTACTCAGCCATATGCCTAGCTGTGTTGTCAGTTGGAGCAGTTCTGACCACCGCCAACCCCCTCAATACTGAGTCAGAAATTGCCAAGCAAGTGCACGATTCAGGTGCCAAACTAGCCATCTCAGCACCCGAGGAGCTACACAAACTGGTCCCAACTGGGGTTCCTACAATTCTCACTTCTCGTCCTAATAATGGGGATATTTTATCAGTTGAAGAGTTAATAGAAGGTTGTTATAATTCACCAGAGTTGCCACAAGTTCCTGTGGCACAATCAGACACTGCTGTTATACTTTACTCTTCAGGGACCACAGGGACAAGCAAAGGTGTGATTTTAACTCATGCAAATCTCATTTCCACAATAAGACTACTCTTATGGTCTGCTGATGTCAGTGGATCCCAAGACGATGTTTTCTTGGCCTTCATTCCAATGTTTCATATCTATGGACTGGTGTTCTTTGGAATAGGATTGTTGTGTGTTGGTATCACAACAATTTTGATGCAGAAGTATGACTTCCAAGGTATGCTTGATGCAATCCAGAAGCACAAGGTTAATAACTTATCAGCAGTGCCACCAGTGGTCCTTGCACTAGTAAAACATGCAAGCAAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGGGTGGGGACAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACTGGAGTTCAGGAAGATGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGGCTAACAGAAAGTAGTGGTGGAGCCACATTTTTTGCCTCAGATAATGATTGTAAAGCTCATCCAGATTCATGTGGGATGTTGATTCCAACTTTTTGTGCAAAAGTGATAGACATTGAAACGGGGAAGCCTTTGCCTCCTCGCAAAGAAGGAGAGTTATGGTTCAAAAGTCCTACCATTATGAAAGGATATCTGGGAAATTTGGAGGCAACAAGTGCAACAGTTGATTTAGAAGGTTGGTTGAGGACTGGTGATCTTGGCTACATCGATGAGAATGGATTTGTTTATATAGTTGATCGGATAAAGGAGCTAATCAAGCACAATGGGTATCAGGTGGCTCCCGCTGAACTAGAATCTGTGCTGCTAAGTCATCCCCTTATAGTTGATGCAGCAGTTATACCGGTTGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGTTCTGAACTCTCGGAAGATCAAGTCATTCAATTTGTTGCAGGACAGGTGGCTCCGTATAAGAAAGTGAGAAGGGTGCGTTTCATTGACACTATTCCAAGGTCAGCTGCTGGCAAGATATTGCGCAAGGATCTTGTTTCTCAAAGCAAATATCAACTTGTCTCCAAGTTATGA 1710 0.4339 MSGEEIWPSNEEYNKSLPPFGNRSGYNSRTGIYHSLVKLGTKHEIPIKPDLNTANFVLSQFPQAHLAEAKIAFIDSGTKRSVSYDELRRSTYSLASALFHGLEVRKGDVVFLLSPNSILYSAICLAVLSVGAVLTTANPLNTESEIAKQVHDSGAKLAISAPEELHKLVPTGVPTILTSRPNNGDILSVEELIEGCYNSPELPQVPVAQSDTAVILYSSGTTGTSKGVILTHANLISTIRLLLWSADVSGSQDDVFLAFIPMFHIYGLVFFGIGLLCVGITTILMQKYDFQGMLDAIQKHKVNNLSAVPPVVLALVKHASKARCDLSSLRRVGTGAAPLSKEVALEFRKMFPWVELRQGYGLTESSGGATFFASDNDCKAHPDSCGMLIPTFCAKVIDIETGKPLPPRKEGELWFKSPTIMKGYLGNLEATSATVDLEGWLRTGDLGYIDENGFVYIVDRIKELIKHNGYQVAPAELESVLLSHPLIVDAAVIPVEDEETGQIPMAYVVRAAGSELSEDQVIQFVAGQVAPYKKVRRVRFIDTIPRSAAGKILRKDLVSQSKYQLVSKL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6497g00005 569 Gene3D - 463 565 IPR045851 -
Mupr6497g00005 569 Pfam AMP-binding enzyme 68 466 IPR000873 -
Mupr6497g00005 569 Gene3D - 40 462 IPR042099 -
Mupr6497g00005 569 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Mupr6497g00005 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 559 - -
Mupr6497g00005 569 SUPERFAMILY Acetyl-CoA synthetase-like 63 560 - -
Mupr6497g00005 569 CDD 4CL 45 557 - -
Mupr6497g00005 569 FunFam 4-coumarate--CoA ligase 2 463 564 - -
Mupr6497g00005 569 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Mupr6497g00005 569 FunFam Long-chain-fatty-acid--CoA ligase FadD 42 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6497g00005 Mupr-Chr6497 49535 51482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6497g00005 23 565 Monolignol Biosynthesis Gene Families AT1G20500 43.761 7.63e-157 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6497g00005 K10526 - gmx:100796728 1006.13