Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6490g00003 ATGTTTTCTAGACAAGGTTTATTTAGAAGCAGAAAGAAGGAATGCTCATGTTCTATTTGTCTGTTGCTTTTCTATTTGCAGCTTGTGGTACAAGGAGGATTTCCTTACGGCGATAGCTTCTCCAAAACTATACGAAACGTGTGGTCGTTATTCCCACCTAATCCTTTTGCAAAAGGTATACAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGACAATGGTGTTAGCTGGAGTAAACGGGGAGAATGTGCTCTTACTGATAAAGACTGTGTGATAACTATTGATGATATTTATAAATGGCTTGCGGTAACATTCTTTCTGTGGCTTGTTCTAGCCATTTACTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAATCAATATTGTACTTTCTAAATCCTAGTTATTGGATAGGAAAAGGAGGTCAAAAAGTGAAAGGTTCAGCTCCACGTCAAGAACAAAGTATACCAGATGATGAAGATGTCCTTGAAGAAGAAAACAAAGTGAAAGAGCAACTAACAGAAGGTCTGGTTGACTCAAATGTTTCTGTTCAGATACATGGCCTTGCGAAGACATATCCTGGTACACGTAACATTGGTTGCTGCTGTAAATGTAAAAGAAATCCTCCTTACAATGCTGTTAAGGGTTTGTGGGTGACCTTTGCAAAGGATCAGTTATTTTGTCTTCTAGGACCCAATGGAGCTGGGAAAACCACAGCTATTAATTGTTTGACCGGGATAACTCCAGTAACTGATGGAGATGCGTTAATTTATGGACATTCGATCAGAAGCTCTACTGGCATGTCAAACATTAGAAAGCTTATAGGAGTTTGTCCACAGTTTGATATCCTATGGGATGCACTGTCTGGTCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGGCTGTCCCCAGCGTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAGACTCATGGATGCAGCCAAAGTGAGAGCTGGAAGCTACAGTGGAGGGATGAAACGTCGTCTCAGTGTTGCAATTGCCCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGGCGTGCCATTGTTCTTACAACGCACTCTATGGAAGAGGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGGCTTCGCTGCATTGGCACCTCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCTATGGAAACAATATTGAACGTAGTCCTGCCAATGAAGATGCAATATCTACAGAACATTGCGAGGCAGTGAAGAAATTCTTTAAGATTCGTTTAGATGTAGTGCCAAAAGAGGAGAACAATAACTATCTAACTTTTGTGATTCCTCATGACAGAGAGGCACTCCTGACGAATTTCTTTTCGGAGCTCCAAGATAGAGAAGAGGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAAGCAAGCAGAGCTGGAAAATGCTGCAGCTGAAGGGAGCCTAGTGACCCTGACCTTAACATCTGGGGAATCTGTACAGATTCCTATAGGAGCTAGGTTTGTGGGAATTCCAGGAACAGAGTCTGCAGAAAACCCCACTGGGTTTATGGTAGAAGTATACTGGGAGCAAGATGATACTGGTGCTTTATGTATTGCTGGCCACTCGCAGAAAGTTCCTATTCCTCCTAGCGTTCAACTATCATCCTCTCCAGCAAGATACCGTAGAAATTTACGCCGGTCAGGATCAGTTCATGGGGTTGTGATTGATCCAAGTCAAGTTAGTTCAGTCGATTTTCATTGA 1902 0.4169 MFSRQGLFRSRKKECSCSICLLLFYLQLVVQGGFPYGDSFSKTIRNVWSLFPPNPFAKGIQVLSDAVATSEDNGVSWSKRGECALTDKDCVITIDDIYKWLAVTFFLWLVLAIYFDNIIPNASGVRKSILYFLNPSYWIGKGGQKVKGSAPRQEQSIPDDEDVLEEENKVKEQLTEGLVDSNVSVQIHGLAKTYPGTRNIGCCCKCKRNPPYNAVKGLWVTFAKDQLFCLLGPNGAGKTTAINCLTGITPVTDGDALIYGHSIRSSTGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSITQTSLAEVRLMDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNIERSPANEDAISTEHCEAVKKFFKIRLDVVPKEENNNYLTFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIAKQAELENAAAEGSLVTLTLTSGESVQIPIGARFVGIPGTESAENPTGFMVEVYWEQDDTGALCIAGHSQKVPIPPSVQLSSSPARYRRNLRRSGSVHGVVIDPSQVSSVDFH 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6490g00003 633 Pfam ABC transporter 217 360 IPR003439 GO:0005524
Mupr6490g00003 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 185 431 IPR003439 GO:0005524
Mupr6490g00003 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 413 IPR027417 -
Mupr6490g00003 633 CDD ABC_subfamily_A 185 419 - -
Mupr6490g00003 633 Gene3D - 185 429 IPR027417 -
Mupr6490g00003 633 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 160 526 IPR026082 GO:0016020|GO:0055085|GO:0140359
Mupr6490g00003 633 SMART AAA_5 224 408 IPR003593 GO:0016887
Mupr6490g00003 633 ProSitePatterns ABC transporters family signature. 333 347 IPR017871 GO:0005524|GO:0016887
Mupr6490g00003 633 FunFam ABC transporter A family member 2 175 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6490g00003 Mupr-Chr6490 3079 7327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6490g00003 229 430 Calmodulin-binding Proteins AT2G36910 23.585 5.16e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6490g00003 - - gmx:100786538 1106.66