Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr646g00003 ATGGAGCCCGAGCCCGGGCCTGAGTTTAATTCGAAGGAGGAAGCATTCTCGTACTACCAAGCCCACGCCAAATCCGTGGGCTTCTCCGCCATAATCAAAGCCAGCCGTCGATCCCGCATCTCCGGCAACTTCATCGACGCCAAATTTGCCTGCAGCCGTTACGGCACTTCCCCCACTCCAAACCCTCATAAACCCAAACGGGCCCGAACCCGAACCAACAACCTCTCTCGGCCCAACAAAACCGATTGCAAGGCCTCCATGCACGTCAAACGAACACACCACGGTACATGGATCATCTCTTCCTTCATCAAACACCATAACCACCCAACTCACCCTCACCACAACGACACCAACAATGCAACTACTTCAAGGAAACCTAAGATTAAAAAAACGCTGCACCATTTGCTTTTTGCCGAAGGAGACCTTCAATTTTTGCTCAATACTTTGATGTGTATGCAAAACGAAAACCCTAATTTCTTTTACGCGGTGGATTTTAACGAGGAGCAGCAATTGCGAACTGTTTTCTGGGTGGACGCTAAAGCTAGGCTTGATTATAAACACTTTAGCGATGTGGTGCTTTTGGACACCACGCATGTGAAGAACGAGTATAAATTGCCCTTTGTTCCCTTTGTTGGTGTGAACCACCATTTACAGTTTTTGTTGCTGGGATTGGCCTTTGTGTCCGACGAGTCCGAATCCACGTTTGCGTGGTTGATGAGGAATTGGTTGAGGGCAATGGGAGGGTGTGCTCCCAAGGTGATGCTCACCGACCGCGATGAAGCGCTGAGAAAAGCAGTTGCTGAAGTGGTGCCTGAGTCTTGTCATTGTTTTTGTCTGTGGCATGTGTTGAGTAAGGTTCCGGAGAAGCTCGGTCGCGTGGTGCATCGGAATGGGGAATTTATGAGTAGGTTTAACAAGTGTGTTTTGAGGTCGAGGACTATGGAGCAGTTTGAGAAGAGGTGGAGGAAATTGGTTGAGAGGTTTGATTTAGGTGAGGATAGTTGGTTGCGGGAGATTTATGAGGATCGTGATCGGTGGATACCGGCGTTTATGAAAGGCAGGGTGGTTTTAGCAGGGATGTCGACTGTGCTGAGATCAGAAGCTATGAACTGTCTGTTTGACAAATATGTGCAGAGGAAAACTACATTGAAAGAGTTTTTGGAGCAATACAAAGTCGTATTGCGGGATAAGTGTGACGAGGAAGCAAAAGCGGATTTTGAAATGTTGCATAGACAGCCAGTGTTGAAGTCTCCCTCGCCGTTTGGGAAACAAATGGCGGAGTTGTACACGCATGTGGTGTTTAAGAATTTCCAGAGCGAGGTTTTGGGGGCTGTTGCTTGTCATCCAAGGAAAGAAAGTGAGGATGGACCAACAAAAATGTTTAGAGTTCAGGATTTTGAAGAGAATCAAGACTTTGTTGTTGCGTGGAATGAATCGACCTGTGAAGCATTGTGTTCCTGCTATTCGTTTGAATTCAATGGCTTTCTTTGTAGGCATGTAATGATTGTGTTACAGATTTCTGGTGTGCATAGCATCCCACCTCGGTATATATTGAAACGCTGGACGAAAGATGCCAAGAGTAGACAAACAGGGAGAGTTCTGTCACTGTCAGATGCGGTGGTCTCTGACTCTATGGCTATGCGCTATAATAATTTATGTCAACAAGCCTTTGAATTGAGCGATGAAGGGTCTTTATCACAACAGAGTTACGTTGCTGCTGTTAATGCATTGGAAGCAGCTTTGAGAAAGTGTGAGAGCCTGAATGATTCAGTTCAGAGTGTCAGAGAACCGAACCCGCCATGTTTTCATTCTCAAGAGGTGAATCTAAGTAACAGTGTGGGTCATACTAACAAAAAGGATAGTACTGATAAAAAAAGACAGGTATGCCCAGAACCAGAGATAATTTCTATGGGAGTCAATTGTAGGTGGCAGCAAGTGGAAAACACCAATGCACGAGCAGCGGGTCTTGATTGTTCGAATGAATCACAGCAGAGCATTCAAGAGATGGGTCAGCTGAACTCAAGAGCTCAGAACCTGGATGGCTATTTTGCTACTCAACAAATTGATTCAGGAATTTGCCAATTGAATACAATAGCTGCCATTCGCACTGATTTTTACTGCAACCAGCATGGCATCCATGGCCTGGGTCAGTTGAACTCATTTGCACCCATCCATGATCCTGATCCCCACTACATGGCCCCACAAAGGATGAATGAGATGGGCCAGCCCGATGGTGGGTCCTCACAAATGTATGGGATGGAGTTTAAG 2268 0.4625 MEPEPGPEFNSKEEAFSYYQAHAKSVGFSAIIKASRRSRISGNFIDAKFACSRYGTSPTPNPHKPKRARTRTNNLSRPNKTDCKASMHVKRTHHGTWIISSFIKHHNHPTHPHHNDTNNATTSRKPKIKKTLHHLLFAEGDLQFLLNTLMCMQNENPNFFYAVDFNEEQQLRTVFWVDAKARLDYKHFSDVVLLDTTHVKNEYKLPFVPFVGVNHHLQFLLLGLAFVSDESESTFAWLMRNWLRAMGGCAPKVMLTDRDEALRKAVAEVVPESCHCFCLWHVLSKVPEKLGRVVHRNGEFMSRFNKCVLRSRTMEQFEKRWRKLVERFDLGEDSWLREIYEDRDRWIPAFMKGRVVLAGMSTVLRSEAMNCLFDKYVQRKTTLKEFLEQYKVVLRDKCDEEAKADFEMLHRQPVLKSPSPFGKQMAELYTHVVFKNFQSEVLGAVACHPRKESEDGPTKMFRVQDFEENQDFVVAWNESTCEALCSCYSFEFNGFLCRHVMIVLQISGVHSIPPRYILKRWTKDAKSRQTGRVLSLSDAVVSDSMAMRYNNLCQQAFELSDEGSLSQQSYVAAVNALEAALRKCESLNDSVQSVREPNPPCFHSQEVNLSNSVGHTNKKDSTDKKRQVCPEPEIISMGVNCRWQQVENTNARAAGLDCSNESQQSIQEMGQLNSRAQNLDGYFATQQIDSGICQLNTIAAIRTDFYCNQHGIHGLGQLNSFAPIHDPDPHYMAPQRMNEMGQPDGGSSQMYGMEFK 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr646g00003 756 ProSiteProfiles Zinc finger SWIM-type profile. 472 508 IPR007527 GO:0008270
Mupr646g00003 756 MobiDBLite consensus disorder prediction 55 87 - -
Mupr646g00003 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 585 IPR031052 GO:0006355
Mupr646g00003 756 SMART 26again6 483 510 IPR006564 GO:0008270
Mupr646g00003 756 Pfam SWIM zinc finger 473 504 IPR007527 GO:0008270
Mupr646g00003 756 MobiDBLite consensus disorder prediction 595 627 - -
Mupr646g00003 756 Pfam MULE transposase domain 191 284 IPR018289 -
Mupr646g00003 756 MobiDBLite consensus disorder prediction 595 616 - -
Mupr646g00003 756 Pfam FAR1 DNA-binding domain 17 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr646g00003 Mupr-Chr646 27452 31577 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr646g00003 MULE 4.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr646g00003 - - gmx:100792626 1100.12