Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6468g00001 ATGCCACTCCTTGTCATTGGTGTGAACAAGGATGTCCAAATCGACATTTTTCTCGTACCCAGTTGTGATCAAACCTCCTCGGCGCTCGGTGTTGTTGCTCTTTTGGTGAGAGTGGATATGGAAGAACGGTACGAGACATTGAAGGAGCTTGGTTCAGGGAACTTCGGAGTGGCAAGGTTGGCCAAAGACAAGAACACAGGGGAACTTGTTGCTATCAAATACATAGAAAGGGGAAAAAAGATTGATGCGAATGTTCAAAGGGAGATAGTTAACCACCGATCTTTAAGGCATCCGAATATTATCAGGTTCAAAGAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTCTTCGAAAGGATATGCAATGCCGGTCGATTGAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAATTAATATCTGGAGTTAGCTATTGTCATTCCATGCAAATATGTCATAGAGATCTGAAATTGGAGAACACACTATTGGATGGAAATCCAGCTCCTCGTCTTAAAATCTGCGACTTTGGTTTCTCCAAGTCTGCTTTGTTGCACTCTCAACCCAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAAGTTTTGTCACGAAAGGAATATGATGGAAAGGTTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTATGTCATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAAAAACTTCAGAAAGAGTATTGGGAGAATTATGAGTGTTCAATACTCCATACCCGACTACGTACGTGTCTCTAAGGAGTGTAGGCATCTTCTCTCTCGTATTTTTGTTGCCAATCCTGCCAAGAGGATCACCATCTCGGAGATAAAACAGCACATTTGGTTCAGGAAGAACTTGCCAAGGGAGATAATTGAGGCTGAAAGAAGAGGTTACGAGGAAACAGAAAAGGACCAACCAAGCCAAAGTGTGGAAGAAATCATGCGGATCATACAAGAGGCAAGGACAAAAATCCAAATTGGTGAGCAAGCTGGCACAGGATCGTCGAATGCTGTGCATGGTGACGAGGCTAATGAGGAAGTTCATGTTAATGACGACTATGCCAAATACCTAATCCTTGATTAA 1137 0.431 MPLLVIGVNKDVQIDIFLVPSCDQTSSALGVVALLVRVDMEERYETLKELGSGNFGVARLAKDKNTGELVAIKYIERGKKIDANVQREIVNHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGRIMSVQYSIPDYVRVSKECRHLLSRIFVANPAKRITISEIKQHIWFRKNLPREIIEAERRGYEETEKDQPSQSVEEIMRIIQEARTKIQIGEQAGTGSSNAVHGDEANEEVHVNDDYAKYLILD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6468g00001 378 CDD STKc_SnRK2 43 299 - -
Mupr6468g00001 378 SMART serkin_6 44 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6468g00001 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Mupr6468g00001 378 FunFam Serine/threonine-protein kinase SRK2E 120 308 - -
Mupr6468g00001 378 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Mupr6468g00001 378 ProSiteProfiles Protein kinase domain profile. 44 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6468g00001 378 FunFam Serine/threonine-protein kinase SRK2E 38 119 - -
Mupr6468g00001 378 PANTHER SERINE/THREONINE KINASE 42 332 - -
Mupr6468g00001 378 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Mupr6468g00001 378 SUPERFAMILY Protein kinase-like (PK-like) 32 309 IPR011009 -
Mupr6468g00001 378 Gene3D Transferase(Phosphotransferase) domain 1 120 308 - -
Mupr6468g00001 378 Pfam Protein kinase domain 44 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6468g00001 Mupr-Chr6468 5276 9355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6468g00001 43 312 CBL-interacting serine-threonine protein kinases AT4G24400 44.484 5.03e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mupr6468g00001 Pkinase 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6468g00001 K14498 - gmx:547790 653.669