Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6467g00008 ATGTCAAGTCTGCAGATGTGTCATGTGGATTTGGAGCAAGGGGGTCACCACCACCGTTCTGTGAGTGGCAGTGACATTAGCATGTGCTTTTCTGATGCTGAGAATGCTTCCTGCTATTCCCATTTCTACTCAACAAACGGTGACCCTTGTGATGATTACAGTTTTGCTTGTGTTTCTGATGCTGAGAGTGGTTCCAGGAGGGCTTCTTCTGCCACTGATTGTTCAGTGGAGGTGGAAATTCAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGCCAAAGTGGAAAGGGATTGCAGGATTTGTCATCTTGGTTTGGAGAGTGATAGTCAAGAGTCTGGAGTTCCCATTGAATTGGGGTGTTCTTGTAAGGATGATTTGGGTGCTGCTCACAAGAACTGTGCTGAGGCCTGGTTCAAGATTAAGGGGAATAGGACATGTGAAATATGCCATTCTGTTGCACGGAACGTTTATGGAGCAAATGAGGAGATAGCACAGACATTGAGTGACAGCAACAATGCTGCAGCATCCACAATCTCAACATCATCTCCTCAACCAGAAACTCCAAGATTTTGGCATGGCCATCGCTTCTTGAATTTTCTTCTTGCTTGTATAGTAATTATATAA 624 0.4455 MSSLQMCHVDLEQGGHHHRSVSGSDISMCFSDAENASCYSHFYSTNGDPCDDYSFACVSDAESGSRRASSATDCSVEVEIQSGVPEIKVHLAKVERDCRICHLGLESDSQESGVPIELGCSCKDDLGAAHKNCAEAWFKIKGNRTCEICHSVARNVYGANEEIAQTLSDSNNAAASTISTSSPQPETPRFWHGHRFLNFLLACIVII 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6467g00008 207 PANTHER ZINC FINGER, RING-CH-TYPE 17 206 - -
Mupr6467g00008 207 SMART ringv_2 97 150 IPR011016 GO:0008270
Mupr6467g00008 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 159 IPR013083 -
Mupr6467g00008 207 SUPERFAMILY RING/U-box 95 153 - -
Mupr6467g00008 207 ProSiteProfiles Zinc finger RING-CH-type profile. 90 156 IPR011016 GO:0008270
Mupr6467g00008 207 Pfam RING-variant domain 98 149 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6467g00008 Mupr-Chr6467 34005 37820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6467g00008 67 206 C3H Transcription Factor Family AT5G05830 57.042 4.76e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6467g00008 - - gmx:100812277 340.887