Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6467g00004 ATGGAACAGGAAGAAACCGCCGCCACCGCCATCGACGCCGACGGGAGCGGCGACGAGGGGTTGCTCGGGCTAGGCGGCGGTGGCGGTGGCGGCAGGGACAGAGTGAAGGGTCCTTGGTCGCCGGAAGAGGACGCCATTCTGAGTCGGCTGGTGAGCAAGTTCGGCGCCAGAAACTGGAGCCTCATCGCGCGCGGGATCAGCGGAAGATCCGGCAAGTCGTGCCGGCTCCGGTGGTGCAACCAGCTCGACCCCTCCGTTAAGCGCAAGCCTTTCACCGACGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGGAATAAATGGGCAGCCATTGCCAGGCTTCTACCAGGAAGAACAGATAATGCCATTAAAAACCACTGGAATTCCACTTTGCGGCGTCGGGGAGTTGAACATGATAAGATTAAATTAGAATCTGGCAATTTCGTGGAAGATGTTAGCTTGGAGAAAGCAAAAGCTTCATCAGAAGACACTCTATCATGTGGAGATGTTTCTTTGAAATCCTCAGAAGGGAGAGATGTCAGTTCTGTGGAGATCATGGACGATAAATTTGATGACAAAGCACAAACTGAGGATCAATTACACCATGAAATCAGGGACCCACCTACCCTTTTCCGGCCAGTAGCACGTGTAAGCGCTTTTAGTGTATATCACTCATTTGATGGTATACAGCCTTCAACATCAATTCAAAGACCTGTTCCCATACAAGGACCCATTTTACAACCATCAAAACCAGATATGGAATTTTGTAAAATGATTGAAGGAATTTGTGGTGACCAGTCAGTACCTCACCAATGTGGACATGGTTGCTGTGCTGCTCCAAATGGTAGAAAATCCAAAAGCTCTTTGTTGGGACCAGAATTCATTGAACTTTCAGAACCCCCATCTTTCCCAAACTTTGAATTGGCTGCAATAGCTACAGACATTAGCAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGCAGCACCTCTGGCAGGGTAATACCTAATGGATCTCAAAAGTTT 1050 0.4876 MEQEETAATAIDADGSGDEGLLGLGGGGGGGRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDKIKLESGNFVEDVSLEKAKASSEDTLSCGDVSLKSSEGRDVSSVEIMDDKFDDKAQTEDQLHHEIRDPPTLFRPVARVSAFSVYHSFDGIQPSTSIQRPVPIQGPILQPSKPDMEFCKMIEGICGDQSVPHQCGHGCCAAPNGRKSKSSLLGPEFIELSEPPSFPNFELAAIATDISNLAWLKSGLENSSVKMMGSTSGRVIPNGSQKF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6467g00004 350 Gene3D - 90 136 - -
Mupr6467g00004 350 CDD SANT 90 133 IPR001005 -
Mupr6467g00004 350 SMART sant 35 84 IPR001005 -
Mupr6467g00004 350 SMART sant 87 135 IPR001005 -
Mupr6467g00004 350 FunFam Transcription factor MYB44 90 136 - -
Mupr6467g00004 350 Pfam Myb-like DNA-binding domain 39 96 - -
Mupr6467g00004 350 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Mupr6467g00004 350 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Mupr6467g00004 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
Mupr6467g00004 350 CDD SANT 38 80 IPR001005 -
Mupr6467g00004 350 SUPERFAMILY Homeodomain-like 33 129 IPR009057 -
Mupr6467g00004 350 PANTHER MYB PROTEIN-RELATED 36 183 - -
Mupr6467g00004 350 MobiDBLite consensus disorder prediction 1 38 - -
Mupr6467g00004 350 FunFam MYB transcription factor 36 87 - -
Mupr6467g00004 350 Gene3D - 35 87 - -
Mupr6467g00004 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6467g00004 Mupr-Chr6467 6760 13277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6467g00004 24 348 MYB Transcription Factor Family AT3G09230 51.488 5.69e-108 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6467g00004 Myb_DNA-bind_6 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6467g00004 K09422 - gmx:100811740 602.438