Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6460g00014 ATGAGTGATGCAAAAGAGAATGAGGAAGCAGGGCAGAATGTACCCTTGTCTGTGGAAGAAACCCAGCAGTTAGTTGAAGCACAGGTTCAACCTGAAGATTTGACTGCTCCTGTGTCCATAGTGGATACTTTAAATCATGTAGAAAATGGGAAGGTAGAGGTAGAGGCACCGGTGGAGGATATAATTGTGAAACCAGAAGTCAATTCAGAGTTTTCACAAGAAGATGTTGTAAATAGGGAAAATATTCTTCACTCTGTCCCTCTAATGGACAATACTCAAGTTTTAAATAAACCTGAAGGCGCATATGCATCAGATGTGAAGAGCAAAGCTGAAGAAGTTCCTCAGTGTGACAAGGGCATTGGGAATGATGCTAATGTTTGTCAAAGCAATGCTGATATTGCTCAGGTCTTAAATAAAACTGAAGGCGAATATGCATCAGGTGTAAAGAGCAAAGCTGAAGAAGTTCCTCAATGTGATATGGGCATCGTGACTGATGCTAATTTTTGTCAAAACAATGCTGATACTGCTGAAACGGCTGCAGAGGCGAAGTCCCAACCTTGTGAAGTGGCTGATAGTAAAACTTGCAATAATGGTGACTCCTACTCCGTACACTGTAGTCATAATGAGCCTAATACACCACAAGCCGTTCCTGCTGACATAAAACCAGAAATCAAGACTGGATTTGAAATTGAGAATAAGGATAATGAAAAGCAGGCTACTGTTGCACATGCAGATAATGGAAATTCAATCTCAAAGAACTTGTATTTTTTGGATCCTGACTATTCATATGATGGTAATGAGTCAGGAACAGAAGAGGAGCAGTCAGCTTTTATGAAGGAGCTTGAAAATTTCTTTAGGGAGAGGAGCATGGAATTCAAACCACCCAAGTTCTATAAAGAGGGGCTTAATTGCCTTAAGACATGCACCACAGTTTCATGGACTTTTCGGGTTTTTTATGAGAAGGCACTTCTTGACTATGAAAGGCATAAAACAAAAGGTGGTGAGCTGAATGTGCCTATTACTTCTCATTCAGAGCCAATGAATATTGAAAATCAGGGTTCAGCATCAGGTAGGGCACGGAGAGATGCTGCAGCAAGGGCTATGCAGGGTTGGCACTCGCAACGTCTCCTTGGCAATGGTGAAGTTAGTGATCCTATTATTAAGGATCGGAATTCTTTGTCTACGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATTTACTTAAACGCAAGAAACCATCAGACATGGTTAATGCAGTCAAAGTGGCACATAGTAAACCATCTAAACCACAGTTAAGACACATATTGGACATGTCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGTGAAGAGGTGCGTGTTCAATCAGACCCAGCTGGACGCTTGGTGATCAGTGGTGAGCCTGAGCATTCTGACAATCCATGGGGGGTGACACCTTTCAAGAAGGTTGTCAGCTTGCCTTCAAGAATTGATACTCAGCAGACGTCAGCTGTGGTGACCTTGCATGGACAGTTGTTTGTTCGAGTTCCATTTGAGCAATCAGAGTAG 1617 0.4205 MSDAKENEEAGQNVPLSVEETQQLVEAQVQPEDLTAPVSIVDTLNHVENGKVEVEAPVEDIIVKPEVNSEFSQEDVVNRENILHSVPLMDNTQVLNKPEGAYASDVKSKAEEVPQCDKGIGNDANVCQSNADIAQVLNKTEGEYASGVKSKAEEVPQCDMGIVTDANFCQNNADTAETAAEAKSQPCEVADSKTCNNGDSYSVHCSHNEPNTPQAVPADIKPEIKTGFEIENKDNEKQATVAHADNGNSISKNLYFLDPDYSYDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYKEGLNCLKTCTTVSWTFRVFYEKALLDYERHKTKGGELNVPITSHSEPMNIENQGSASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSLSTQKREKQLKSINLLKRKKPSDMVNAVKVAHSKPSKPQLRHILDMSVVDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHSDNPWGVTPFKKVVSLPSRIDTQQTSAVVTLHGQLFVRVPFEQSE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6460g00014 538 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 154 306 IPR045147 GO:0006357
Mupr6460g00014 538 Pfam Hsp20/alpha crystallin family 455 537 IPR002068 -
Mupr6460g00014 538 SUPERFAMILY HSP20-like chaperones 447 534 IPR008978 -
Mupr6460g00014 538 SMART bright_3 272 332 IPR001606 GO:0003677
Mupr6460g00014 538 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 438 538 IPR002068 -
Mupr6460g00014 538 SUPERFAMILY ARID-like 265 344 IPR036431 GO:0003677
Mupr6460g00014 538 Gene3D - 431 538 IPR008978 -
Mupr6460g00014 538 MobiDBLite consensus disorder prediction 337 365 - -
Mupr6460g00014 538 FunFam AT-rich interactive domain-containing protein 3 431 538 - -
Mupr6460g00014 538 MobiDBLite consensus disorder prediction 337 355 - -
Mupr6460g00014 538 CDD ACD_sHsps-like 453 533 - -
Mupr6460g00014 538 MobiDBLite consensus disorder prediction 1 30 - -
Mupr6460g00014 538 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6460g00014 Mupr-Chr6460 68519 76815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6460g00014 255 536 ARID Transcription Factor Family AT1G76510 53.145 2.47e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6460g00014 - - gmx:100803374 770