Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr645g00002 ATGGGTTGTGTATTACATGAATCGTCTGTTGAAAGATGTTTGACTGTGGTTACAAGTCGCAGTATGTTGGATGACTTGGATTCTAGACTATCATCATCTTCTGAAGCTGCAGCTAAAACATGTGGATTTAGTATTGATAAATTAAGCCATGGTGGCCATGGAAGCAGTACAACTTCTAGGTCTTTTAAAAGAGGAATTAGAAAGGGTTCTGAAGGTCTGAAGTCAATTGGTCGATCACTTGGATTTGGGGTATCCAAGGCAGTGTTCCCTGAAGATCTTAAAGTTTCAGAAAAGAAGATATTTGACCCTCAAGACAAATTTTTGCTCTTGTGGAATAAGCTTTTTGTTATCTCATGCATTTTGGCTGTGTCTGTTGATCCACTGTTTTTTTATCTCCCTGTCATCAATGATTCATTGCACTGTCTTGGTATAGACCGAAAGTTGGCAATTACAGTTACCACCTTGAGGACATTTATTGATGCTTTCTATCTTATACACATGGCTCTTCAATTTCGTACTGCTTATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAGCTTGTGATAGATCCAGCACAGATAGCCAAACGTTACCTACAGCGGTATTTCATTATTGATTTCCTATCAGTGTTGCCCTTACCGCAGATTGTGGTTTGGAGATTTCTGCAGAGGTCAAAAGGTTCAGATGTACTTACAACAAAGCGGGCCCTGCTGTTCATTATTTTACTTCAGTACATTCCTAGATTTTTCCGGATGGTACCATTGACTTCTGAACTTAAGAGAACAGCTGGTGTGTTTGCTGAAACTGCATGGGCCGGTGCTGCATATTATTTGCTATTATTCATGCTTGCTAGTCATATAGTTGGGTCATTTTGGTACTTGTTAGCTGTTGAACGCAATGACTTTTGCTGGCAAAAGGCCTGTAGTGACAATGGGTACAATACAAATTTCTTGTATTGTGGCAACCAGTACATGGAAGGTTATAATGCCTGGCAAAACAGAAGTGAAAACATTCTTACGTCACAGTGCTCTGCAGATAATGATAATTCACCTTTTGACTATGGAATTTTTGAACAAGCCTTGTCATCTGGTATTGTCTCAACTAAGAAGTTCTTCTCCAAGTACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACACTTGGCCAGGGGCTTCAAACTAGCACCTACACTGGGGAGGTTATCTTTTCAATTGCACTAGCCATAGCTGGCCTTATCCTCTTTGCTCTTCTGATTGGTAACATGCAGACGTATCTTCAGTCTCTTACAATTAGACTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCACAAGAGCTTAGAGAGCGTGTGAGACGATATGATCAATACAAGTGGTTGGCAACACGCGGTGTAGATGAAGAAAGTTTGGTTCAGAGTTTGCCAAAGGATCTTCAAAGGGACATTAAGCGTCACCTTTGTCTGGCACTAGTGAGAAGGGTTCCACTGTTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAGCCATGTTTATTTACTGAGAGTACTTACATTGTCCGCGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATTCGGGGTCGCCTTGAGAGTGTTACTACAGATGGTGGGAGGAGCGGATTCTTTAATCGTGGTTATCTAAAAGAGGCTGACTTCTGTGGGGAGGAGCTTTTGACCTGGGCACTGGATCCCAAATCTGGCTCTAACCTCCCATCTTCTACTCGAACAGTTAAAGCTTTAACGGAGGTTGAAGCTTTTGCCTTAACTGCTGAAGAGTTAAAGTTTGTTGCCGGTCAGTTTAGGCGCCTGCACAGTAGACAGGTTCAGCACACGTTTCGCTTTTACTCCCAACAATGGAGGACTTGGGCTGCATGCTTTATTCAAGCAGCATGGCGTCGGTATTCCAAAAGGAAAATTCTGGAGCTTTCTCGGAAAGAAGAACCTGAGGAGTCAGAGAGAACTCGCAGCAGTGCTGGTGGCAGTTCGTACAGCCTTGGTGCCACCTTCTTGGCCTCAAGATTTGCCGCAAATGCTCTTCGTGGTGTACATCGCCATCGGCGGGAAGCCAAGAGTGCCAGGGAATTAGTGAAGCTACAGAAACCTCCGGAGCCTGACTTTACAGCTGATGATGCAGACTAA 2208 0.4334 MGCVLHESSVERCLTVVTSRSMLDDLDSRLSSSSEAAAKTCGFSIDKLSHGGHGSSTTSRSFKRGIRKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLTTKRALLFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSDNGYNTNFLYCGNQYMEGYNAWQNRSENILTSQCSADNDNSPFDYGIFEQALSSGIVSTKKFFSKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEESLVQSLPKDLQRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGYLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTAEELKFVAGQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKILELSRKEEPEESERTRSSAGGSSYSLGATFLASRFAANALRGVHRHRREAKSARELVKLQKPPEPDFTADDAD 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr645g00002 735 SMART cnmp_10 507 638 IPR000595 -
Mupr645g00002 735 Gene3D Helix hairpin bin 435 498 - -
Mupr645g00002 735 ProSiteProfiles cAMP/cGMP binding motif profile. 507 637 IPR000595 -
Mupr645g00002 735 Pfam Ion transport protein 110 433 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr645g00002 735 CDD CAP_ED 507 638 IPR000595 -
Mupr645g00002 735 Gene3D Jelly Rolls 505 625 IPR014710 -
Mupr645g00002 735 FunFam Cyclic nucleotide-gated ion channel 1 505 623 - -
Mupr645g00002 735 MobiDBLite consensus disorder prediction 711 735 - -
Mupr645g00002 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 92 729 - -
Mupr645g00002 735 MobiDBLite consensus disorder prediction 708 735 - -
Mupr645g00002 735 SUPERFAMILY Voltage-gated potassium channels 102 429 - -
Mupr645g00002 735 Pfam Cyclic nucleotide-binding domain 529 617 IPR000595 -
Mupr645g00002 735 SUPERFAMILY cAMP-binding domain-like 436 627 IPR018490 -
Mupr645g00002 735 Gene3D - 113 432 - -
Mupr645g00002 735 FunFam Cyclic nucleotide-gated ion channel 1 434 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr645g00002 Mupr-Chr645 3950 16920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr645g00002 29 732 Ion Channels AT5G57940 79.632 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr645g00002 K05391 - gmx:100820202 1303.12