Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6448g00006 ATGTACTTGTGGCTGTGGGGGAGTACTTGTATTCATATTGAAGCTGCAAATGATAGTTTAATGCCTGGCAACTTTGTGCTTCAGCAACTTCACCCCAATGGGACAACCACTCTGTTGTGGCAGAGTTTTGATTATCCCTCTGACACTTTGATCCCCACCATGAAGTTAGGCATTAATCACAAAACAGGCCATCATTGGTTACTGGTTTCATGGTTGACTAAATCACTTGCTACTCCTGGTGCCTTTAGTCTTGAATGGGAACCCATGGGACAAGAATTGATCATAAGGAGACGCGGAAAAGTTTGTTGGCGAAGTGGAAAAATGAGGAACAATAGATTTGAGCATATTTCAGAGGATGCGCAACGCATGTTGAAGTACAACATCGTGTCTAATGGGGATGAAGACTCCTTCTCTTTCACTACTACTAATGAAGAGGCTATACCATGGTGGTTCATATCAGAAATTGGGCAGTTATTTGATGATAAAGGATATGTTTCAAGGGCTGATCTATGTTATGGATATAACAACACTTATGGAGGGTGCCAAAGATGGGAGGATATACCTAAGTGTAGGAATTCTGGTGATGTGTTTCAGAGAAAGATTGGTTACTCCAACTATCAGAATTCAACCGTAGAACCAGATACAAATTATGGGTACAGTGATTGCGAGGCCAGTTGCTGGAGCAATTGTACTTGCACTGGATTCAGACATTTCTATCGTAATGGAACGGGATGTACATTCTTTCATTGGAATTCAGAGGAAGATTATACTTCTGACAGTACTGGTGAAAACATTTACATGCTGGTGAACATATTAACCCAGCATAAGGAGAAGAAAAGGAAAGGAATGGTGAAGATGCTACATTTAGCAACATGTAATCGGTCATCTAGTATTGAAGATTTTGAAGTTGATTTAAAGAAGGCACACGACTTAAAAGTGTTCAAGTATACATCAGTTGTGACGGCAACAAATGGGTTCTCATCTGAAAATAAGTTAGGAATGAAGTTGCGCGGAATTCTGCCAACAGGGCAAGAGGTTGCTGTAAAAAGACTTTCAAAAACTTCTAGACAAGGAATTGTGGAGTTTAAAAATGAACTAACACTCATATGTGAACTTCAGCACATGAATCTGGTACAACTATTTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAACAAAAGCTTGGACTTTTATCTATTCGATTGTACTAGAAGCAAATTACTTGATTGGAAGAAGCGCTTCAACATAATAGAAGGAACTTCTCAGGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAGTCATTCACAGAGACTTGAAAGCTAGTAACATTCTTCTTGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTCACGCAACAAGAATCTGCATCAAATACCAACAGGATTGTTGGGACA 1458 0.3875 MYLWLWGSTCIHIEAANDSLMPGNFVLQQLHPNGTTTLLWQSFDYPSDTLIPTMKLGINHKTGHHWLLVSWLTKSLATPGAFSLEWEPMGQELIIRRRGKVCWRSGKMRNNRFEHISEDAQRMLKYNIVSNGDEDSFSFTTTNEEAIPWWFISEIGQLFDDKGYVSRADLCYGYNNTYGGCQRWEDIPKCRNSGDVFQRKIGYSNYQNSTVEPDTNYGYSDCEASCWSNCTCTGFRHFYRNGTGCTFFHWNSEEDYTSDSTGENIYMLVNILTQHKEKKRKGMVKMLHLATCNRSSSIEDFEVDLKKAHDLKVFKYTSVVTATNGFSSENKLGMKLRGILPTGQEVAVKRLSKTSRQGIVEFKNELTLICELQHMNLVQLFGCCIHEEERILIYEYMPNKSLDFYLFDCTRSKLLDWKKRFNIIEGTSQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQESASNTNRIVGT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6448g00006 486 SMART serkin_6 316 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6448g00006 486 Gene3D Phosphorylase Kinase; domain 1 301 396 - -
Mupr6448g00006 486 Pfam PAN-like domain 190 249 IPR003609 -
Mupr6448g00006 486 Pfam D-mannose binding lectin 22 71 IPR001480 -
Mupr6448g00006 486 FunFam Putative DUF26-domain receptor-like protein kinase family protein 318 396 - -
Mupr6448g00006 486 SUPERFAMILY Protein kinase-like (PK-like) 311 486 IPR011009 -
Mupr6448g00006 486 SUPERFAMILY alpha-D-mannose-specific plant lectins 22 73 IPR036426 -
Mupr6448g00006 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Mupr6448g00006 486 ProSiteProfiles Protein kinase domain profile. 316 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6448g00006 486 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 397 486 - -
Mupr6448g00006 486 Pfam Protein tyrosine and serine/threonine kinase 343 478 IPR001245 GO:0004672|GO:0006468
Mupr6448g00006 486 Gene3D Transferase(Phosphotransferase) domain 1 397 486 - -
Mupr6448g00006 486 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 39 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6448g00006 Mupr-Chr6448 21411 24284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6448g00006 292 486 Receptor kinase-like Gene Family AT4G11530 53.431 5.43e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr6448g00006 PK_Tyr_Ser-Thr 3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6448g00006 - - pvu:PHAVU_011G175600g 629.402