Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6447g00002 GGAGGCAAATCTGATGTCTCGCTTTTATCACAAGCCACTGACAAATCTCTGCACCTTTGGCCCCAATACTCCAACAGAGGACCGCTATTCGCCGCAATTCCTCACCCCATGGAAGAATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCTGCCCAGCTTATGGCCTTGGAGAAATTTTATAATGAGCAAAAATACCCCACAGAGGAAATGAAATTAGATCTTTCTGAGGAATTAGGATTGACAGAAAAGCAAATATCTGGATGGTTCTGCCACAGAAGGTTAAAGGATAAAAGATTGATGAAAGATGAAGCTGTTGCTAATGGACGGCAAGATCGTTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGACTTGGGCAAGATTCTTGTGGAAGCAGTAAACACGCTGATTACAAGTATCTGGATCCTAAGGAGGTTGAGAGCCATGGCCTCTACAATCATGAACTTTCAGTTGCAGATATGACCCACAGACGTAGGAACCGTTATCCTGAAAACGTTAGCGGAGTGGATGACACATCATCTGAGAGCAGCTCATTTTTGCAAGAAAGGTTGTTTTCTCAAGGTCAAGATCCATATGATATGGAACCTTCTAGACATCTTACACCTAATGGAGCTCTTCCACCCCTAAATCCCAAAGGTGCAGTTAACATGGGATACAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAAGCATTATCTGGAAGATGGTCCACTACTTGGTGTAGAATTTGATCTGCTTCCTCCAGGGGCATTTGAAAGCCAAACTGCAGATCCAGCTAATGAACCATACTGTGCTGCAAATCCTCCAGTTCCGAATTCTCCAGAAATCTCTGCTGCAAAAAGGCAACCCAGTCTTAGCTCTAGATATGATTCATATTATACTAAATTTAGTTCCCAAGATTTGCATATGGAAGGAGCTGACTTTGGCTCCTTGCATGAATCTGATTTCCAGGATAAACAAGATAAGAAAGCCCGCCAGAATATAAAACAGAGGCAAGCTTTCTACGGTTATACCAATCATTTTCCTGGAAAGAACTCTTTCCCGGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCACTAAGAGTCATAGAATGAGCACTAAGCATGGTGTTGAGGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTGCAGTTAAGCAGAAAGACTTGATGCTGCATGGTTATGATAACATCAATCCGAAGAATATACAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCGAAATTCCCGTGTTCCTATGGATACTGAAGAAAGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGCGGGTAGGAAAGCAAAAAATACATACCACGATGTTGATGGAGCAGGGAGGCTTTCAAATGAAATCATGGTTGCAAAACGAGCTAAAGTTGATACGCTTCCACAATACAATGTGAAACAATCACCTGTTGCTGAGATGGAACAAAGGAAAATTCAGAGATCTGCTGCAGAGATGCCTTCTAGCTTCAGCGAAGACGAAACTGCAGAAACCAGTTCCTCACTGGATTAT 1689 0.4168 GGKSDVSLLSQATDKSLHLWPQYSNRGPLFAAIPHPMEESSELQSEENKVSNEKNKKRKLKTPAQLMALEKFYNEQKYPTEEMKLDLSEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADYKYLDPKEVESHGLYNHELSVADMTHRRRNRYPENVSGVDDTSSESSSFLQERLFSQGQDPYDMEPSRHLTPNGALPPLNPKGAVNMGYKPSGYLKVKGEIEHAAITAVKKQLGKHYLEDGPLLGVEFDLLPPGAFESQTADPANEPYCAANPPVPNSPEISAAKRQPSLSSRYDSYYTKFSSQDLHMEGADFGSLHESDFQDKQDKKARQNIKQRQAFYGYTNHFPGKNSFPDLYEDSTGEASAYNSTKSHRMSTKHGVEGMRSDSASNHSDHYEEKLAVKQKDLMLHGYDNINPKNIQRSEHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKAGRKAKNTYHDVDGAGRLSNEIMVAKRAKVDTLPQYNVKQSPVAEMEQRKIQRSAAEMPSSFSEDETAETSSSLDY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6447g00002 563 Gene3D - 48 119 - -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 541 563 - -
Mupr6447g00002 563 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 118 145 - -
Mupr6447g00002 563 SMART HOX_1 54 116 IPR001356 GO:0003677
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 124 142 - -
Mupr6447g00002 563 SUPERFAMILY Homeodomain-like 52 116 IPR009057 -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 389 420 - -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 35 61 - -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 528 563 - -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 451 475 - -
Mupr6447g00002 563 MobiDBLite consensus disorder prediction 40 61 - -
Mupr6447g00002 563 CDD homeodomain 56 111 IPR001356 GO:0003677
Mupr6447g00002 563 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 37 562 - -
Mupr6447g00002 563 Pfam Homeodomain 56 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6447g00002 Mupr-Chr6447 23341 30695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6447g00002 39 562 Homeobox Transcription Factor Family AT4G03250 40.590 1.18e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr6447g00002 Homeodomain 1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6447g00002 - - gmx:100803515 941.028