Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6440g00001 ATGCTCAATTTTCAGAAATTGTCTCTACTATTTTTGTCGTTGCTGTTTTTGCTGCGGAAGCCTGTGATAGGCAAGAACCACTGCACGCCTAAATCTAAATGCGGACGTGTTCATATTCAATTTCCGTTTTATCTCAGAAACAGCAACTTCAATCACACCACCTACTCTCCCCCTGGGTTCGATCTGTTATGTACCGAAAAATATGAGACTGTGCTGGATCTGCCTGGTCTTCCAATAAAATTGTTTGTTAAAACAATCGATTACAAATCTCGGCAAATTCAAATATATGACCCTGCAAATTGCCTTCCCATTCAGCTCTTGAAACTTGGTAACGCATCCATTTCTCCATTCCAATTTTGGCAGCCAGGTGTCGATTATTTAGGCCAGAACGTTTCCCTCTTCCGTTGCGATTCAATGTCGTCATGCCCTTTTTCGCTATTTTCATCAAACGATGATATTGAACCCCAATTAATATCTTGCACCAAGGTGAAAAATGTTTTGTCCGTCAAGTGGTATTGGTCGTATGTCATAGAAGACGGGACGGTGCTTATGGAATGGTCAAAACCCAACTGTAGTCAGTGTGAAGCACGAGGCCAGAAATGTAAATGGCAGAATGGTACCAACGGTGAAACTGAATGTTCCGTTTGCCCAACAAAAGGGATTCCAACATCAACTATTGTACTCATTGCTGCAGGAGGAATACTTGGTTTGATACTTTTGCTGCTATTGATCATTGCATTGGTTCATGTGTATCGCTATCATGAGATGAAAGGAGAAGACCAGGCTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAACCCACGAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTCAAAGTTTAGGGGAAGGAGCTCATGGAGCAGTGTTCAAAGGAATGCTCTCTCGAGAAATTATCGTTGCTGTCAAGATACTCAACGACACAGTGGGAGATGGGAAGGATTTCATAAATGAAGTGGGAACCATTGGGAAAATTCATCACGTTAACGTTGTTCGCTTACTTGGATTCTGTGCGGATGGGTTCCACCGTGCTCTTGTCTACCATTTCTTTCCAAATGGTTCGTTGCAGAGATTCTTGGCTCCACCCGACAACAAGGATGTTTTTCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGATTGAGTATCTCCATCTTGGTTGCGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTATTAATAGATGACGATTTCATTCCAAAAATAACAGATTTTGGACTAGCCAAGTTGTGTCCCAAAAATCAAAGTACGGTATCAATGACTGCAGCCAGGGGAACCTTGGGCTACATTGCCCCAGAAGTTTTCTCAAGGAACTTCGGTAATGTGTCTTACAAGTCTGACATTTACAGCTATGGAATGTTGCTGTTGGAGATGGTTGGAGGAAGAAAGAATTCAAATATGACAGCCGAGGGAAGTTTCCAAGTTCTGTATCCTGAATGGATCCATAATTTGCTGGAAGGTAGAGACGTGCAAGTTACTATTGAGGACGAGGGAGATGTTAAAATTGCAAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCGGTGGAACCCAGTGGACCGTCCATCCATGAGAACTGTAGTACAAATGCTTGAAGGGGATGGAGACGAGTTAATAGCACCTCCTACTCCTTTTGACATCACCAGTTCTTCTAGAACGAATGCTGATGTTCCACCAAGTCGTCAGAATTTCGAGTTGGAAGTTATTCATGAAATAGAAGAGTAA 1809 0.4218 MLNFQKLSLLFLSLLFLLRKPVIGKNHCTPKSKCGRVHIQFPFYLRNSNFNHTTYSPPGFDLLCTEKYETVLDLPGLPIKLFVKTIDYKSRQIQIYDPANCLPIQLLKLGNASISPFQFWQPGVDYLGQNVSLFRCDSMSSCPFSLFSSNDDIEPQLISCTKVKNVLSVKWYWSYVIEDGTVLMEWSKPNCSQCEARGQKCKWQNGTNGETECSVCPTKGIPTSTIVLIAAGGILGLILLLLLIIALVHVYRYHEMKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSQSLGEGAHGAVFKGMLSREIIVAVKILNDTVGDGKDFINEVGTIGKIHHVNVVRLLGFCADGFHRALVYHFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVAKGIEYLHLGCDHRILHFDINPHNVLIDDDFIPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNSNMTAEGSFQVLYPEWIHNLLEGRDVQVTIEDEGDVKIAKKLAIVGLWCIRWNPVDRPSMRTVVQMLEGDGDELIAPPTPFDITSSSRTNADVPPSRQNFELEVIHEIEE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6440g00001 602 Pfam Wall-associated receptor kinase galacturonan-binding 28 97 IPR025287 GO:0030247
Mupr6440g00001 602 FunFam PR5-like receptor kinase 364 569 - -
Mupr6440g00001 602 Gene3D Transferase(Phosphotransferase) domain 1 364 566 - -
Mupr6440g00001 602 Pfam Protein kinase domain 293 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6440g00001 602 ProSiteProfiles Protein kinase domain profile. 289 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6440g00001 602 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Mupr6440g00001 602 Gene3D Phosphorylase Kinase; domain 1 263 363 - -
Mupr6440g00001 602 FunFam serine/threonine-protein kinase PBS1-like 256 363 - -
Mupr6440g00001 602 PANTHER RUST RESISTANCE KINASE LR10-RELATED 261 578 IPR045874 GO:0004672
Mupr6440g00001 602 SUPERFAMILY Protein kinase-like (PK-like) 271 560 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6440g00001 Mupr-Chr6440 1412 3465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6440g00001 204 572 Receptor kinase-like Gene Family AT1G66910 43.307 6.95e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr6440g00001 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6440g00001 - - gmx:100816669 911.368