Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6423g00003 ATGGAGGCCTCAAAGACAAAGGAAAACCGTGTGCCACCCTCTTCAAATCTCCAAGGCGCTCCAAGAATGGAGACTGTGAAGCCCCTCCATCACCGCCTGCCTCTCAGCAACATCAATCACAATATTATGCCCAATTCTCATCTCAACAAACTAGATCTTTCCCGCAAGTGTACAGCACACACAGTTCAGCAGCACCACCACCCTCAGCCTCCTCAAGAAACTAAGAAACAGAACCTGTTGGCCCCGACCAGTTACCAGTTAGATCATGATATCATAGATATTGATGATGACGAGGATGCCGGTGACAATGCAGTTCCAGTATTTGTGAAGCATACTGAAGCGATGCTCGATGAGATTGACAGGATAGAGGAAGTTGAAATGGAAGATGTGGAGGAACCTGTTTTGGACATAGATGCCTGTGATAGGAACGATCCACTTGCTGTTGTTGAGTACATAGATGATATCTATGGTTTCTACAAGAGTATTGAGAATTCTAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTCTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATTGACAGGTTCTTGGAGCGTCAGGCACTGATTAGAAAGAAACTTCAGTTAGTTGGTGTAACTGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCGTATACAAGAAATGAAGTTTTAGATATGGAGAAATTAATGATGAACATCTTGCAATTCAAGTTGTCTGTGCCAACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGTTCATTCTGATAAAAAGCTGGAGCTCTTGTCTTTCTTCTTGGTCGAGCTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTAATTACTCGGAAGAGAAGCTTCTAGAATGCTCAAGGCTGATGGTTACTTTCCATCGGAGAGCTGGATCAGGGAAACTCACTGGTGTATATAGAAAGTACAGTACATGGAAGTATGGCTGTGCCGCAAAAGTAGAACCAGCCCTATCGCTTTTGGTTGTTTTGAGAGTTTCTGCTTCTACTAGAAACTGCTTTGGTTGTTTTGAGAGTTTGCTTGTACTAGAAGTTGGTTTTGAGAGCTTCACAGACCTATCTACAGAATCATTCCTCCCTAATGGGAAGATTAGGATAAGAATAGGAATGGATAGGAAAGAATTGTCTGTG 1377 0.4241 MEASKTKENRVPPSSNLQGAPRMETVKPLHHRLPLSNINHNIMPNSHLNKLDLSRKCTAHTVQQHHHPQPPQETKKQNLLAPTSYQLDHDIIDIDDDEDAGDNAVPVFVKHTEAMLDEIDRIEEVEMEDVEEPVLDIDACDRNDPLAVVEYIDDIYGFYKSIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQALIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAVHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEEKLLECSRLMVTFHRRAGSGKLTGVYRKYSTWKYGCAAKVEPALSLLVVLRVSASTRNCFGCFESLLVLEVGFESFTDLSTESFLPNGKIRIRIGMDRKELSV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6423g00003 459 Gene3D - 168 280 - -
Mupr6423g00003 459 ProSitePatterns Cyclins signature. 184 215 IPR006671 -
Mupr6423g00003 459 CDD CYCLIN_AtCycB-like_rpt2 282 398 - -
Mupr6423g00003 459 SUPERFAMILY Cyclin-like 143 279 IPR036915 -
Mupr6423g00003 459 PIRSF Cyclin_A_B_D_E 2 411 IPR046965 GO:0016538|GO:0044772
Mupr6423g00003 459 Pfam Cyclin, C-terminal domain 282 397 IPR004367 -
Mupr6423g00003 459 SUPERFAMILY Cyclin-like 281 398 IPR036915 -
Mupr6423g00003 459 SMART cyclin_7 189 273 IPR013763 -
Mupr6423g00003 459 SMART cyclin_7 286 368 IPR013763 -
Mupr6423g00003 459 PANTHER CYCLINS 96 387 IPR039361 -
Mupr6423g00003 459 Pfam Cyclin, N-terminal domain 154 280 IPR006671 -
Mupr6423g00003 459 Gene3D - 154 395 - -
Mupr6423g00003 459 FunFam G2/mitotic-specific cyclin-1 266 394 - -
Mupr6423g00003 459 CDD CYCLIN_AtCycB-like_rpt1 135 277 - -
Mupr6423g00003 459 SMART Cyclin_C_2 282 399 IPR004367 -
Mupr6423g00003 459 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6423g00003 Mupr-Chr6423 11608 14648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6423g00003 53 403 Core Cell Cycle Gene Families AT1G20610 61.798 2.62e-156 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6423g00003 K21777 - gmx:100812029 632.484