Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6413g00004 ATGCCCTTGGAGGGGATTTTCATTGAACCTACTTCAACTTGTTCTACACCTGATCTTTCCCTTCACATAAGCCCTCCAAGCACTTCCTCTTCCTCTTCTCTGATTTGCAACAACACATCTGGTGGTGGCATCAATTATGAGGCACAGGCACACAATTCAACAAACACAAATTTCCCTTCTCAAGCTCACACTGAGCTTTCTCTGGGAAGGAATTTCAGTGGTGGAGGTGGAGCTCTTGAAGAACCACCACCACCACCACACAACAACAACAACAACCCTTATTACCAAACCCAACAACAGGCCCATTTCCATCATCTTCACCACCATTCTAACACTAGTAATGCCTCAAAAGCAACAACAACAAGCACCACAAGCTCCTCCACTCACTTGAATCACATAAATTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTACCCATGGAACATTCAAGAGACAAGGATCATCATGCCAAAATGTGCTTATATCATCACATGCCTACATATCCCTCTTTGTCCTCTTCTTGTTCTCCTCTGTGTTCTTCTTCTTCTCCTGCGCCCTACTTTGCCGCGGCCGCCGCAGCAGGAAACCTGGATCCCATGTCCTATTTAAACTCAGGTGGGCCCACCGCCGCGGCTACCGCAGCATACAGGGCGGCCGCGGCCACAAGGTTTAATGGAATTTCCGGGGAGGCTTTCAAATCTCATCACCCATTGCACCACCATCACTCATCATCACACTATGGGGTTGGACTTGGACCCTCTCATGATGCCTCTTCAGGGTTGATGAGATCAAGGTTTTTGCCCAAGTTGCCAACCAAGAGAAGCATGAGAGCGCCAAGAATGCGTTGGACAAGCACACTCCACGCTCGATTTGTTCATGCGGTTGAGCTTCTCGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTTAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCTGCTTCTTCGGGCCTTTCAGATGGATCCGGAGAAGATGACATGTCTCCAATGGGAAGCAGCGGTGGCATGCGTCAATTTTCAGACCAAAGAGGCCTTTCGGATCGGCCAGTGCAACAAGACATGGATTACTCTTCGGCCAACACTCTATGGAGTAATAACTCTTCAAGTAGAGAAGCTTGGCCACAAACTAATTCTAACGACATAGATGGTTTCAGACCCCCCATCTTCCAGTCACAACCAATATCAGGAGGGCATCAAATCCAGGAGTGTGATTCAACTCAACTGAAGAACAGCTTATCAGGATCAAATATAGAGTGCAAGAAGCCAAGCTTGGAGTTCACATTAGGCAGACCGGATTGGAATGGCAAAGGACAAGCCTAA 1458 0.4746 MPLEGIFIEPTSTCSTPDLSLHISPPSTSSSSSLICNNTSGGGINYEAQAHNSTNTNFPSQAHTELSLGRNFSGGGGALEEPPPPPHNNNNNPYYQTQQQAHFHHLHHHSNTSNASKATTTSTTSSSTHLNHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMEHSRDKDHHAKMCLYHHMPTYPSLSSSCSPLCSSSSPAPYFAAAAAAGNLDPMSYLNSGGPTAAATAAYRAAAATRFNGISGEAFKSHHPLHHHHSSSHYGVGLGPSHDASSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRGLSDRPVQQDMDYSSANTLWSNNSSSREAWPQTNSNDIDGFRPPIFQSQPISGGHQIQECDSTQLKNSLSGSNIECKKPSLEFTLGRPDWNGKGQA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6413g00004 485 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 17 482 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mupr6413g00004 485 MobiDBLite consensus disorder prediction 254 275 - -
Mupr6413g00004 485 MobiDBLite consensus disorder prediction 379 431 - -
Mupr6413g00004 485 SUPERFAMILY Homeodomain-like 295 351 IPR009057 -
Mupr6413g00004 485 NCBIfam myb-like DNA-binding domain, SHAQKYF class 298 351 IPR006447 GO:0003677
Mupr6413g00004 485 MobiDBLite consensus disorder prediction 112 128 - -
Mupr6413g00004 485 MobiDBLite consensus disorder prediction 353 445 - -
Mupr6413g00004 485 Gene3D - 297 354 - -
Mupr6413g00004 485 MobiDBLite consensus disorder prediction 66 128 - -
Mupr6413g00004 485 FunFam Myb family transcription factor 296 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6413g00004 Mupr-Chr6413 12833 18242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6413g00004 148 482 G2-like Transcription Factor Family AT5G16560 46.369 2.15e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr6413g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6413g00004 - - ccaj:109796302 714.146