Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6412g00002 ATGGAAGGAGAGTTTGATAGAGGATGCATAAAGAAGGGGCCATGGAGTAGTGAAGAAGACGAGGTTCTATTGAGACATGTAAACAAATATGGTCCAAGGGAATGGAGCTCCATTCGATCCAAAGGCTTGTTGCCTCGAACAGGAAAATCCTGTCGCCTTAGATGGGTTAATAAACTTAGACCAAACTTGAAGACTGGGTGCAAGTTTACAGCAGAAGAGGAAAGGGTGGTGATAGAATTACAGGCACGGTTTGGGAATAAATGGGCAAAAATTGCAACTTATTTGCATGGGAGAACAGACAATGATGTGAAAAACTTTTGGAGCAGCAGGAGAAAAAGGTTGGAGAGAATGTTGCGGAGGCCACCAACGTTGAAGCCGCAGAAAAACAAGGGGAAAACTCCTCTTAATCAAGTGCAAGTGGAAAAGGTTCCTCCATGCAGTTCCAATCAAGTGGAGGAAAACCTTTCTTACCCTACATCCTATATGGGAAACACCGAGTTGTTCGAGATGATCAACCTACCAGATTTGATAAAGCCAAACTACCAACATTGGGAAAGTGATCCCCTGAGTGCAGTTGAGGTTGATGCCACCCCACTTCACACAGTACCATCGTTTGAGTCTTCATCAGGGTACAACTTCCCTCCACTCCCTGAACCACTAATGGACTTTCCACTCTTCCCAGAGTGCCAGGACCTTGTTCCTGAGCCCTTTGATCCAAATTTTATTGATGGGTTTGAGCAGAAAAAATGTTCAGAATGTTTATGCAGCAGCCAGAAGCTTGGGACCAGCATGCCAAGCCTTGGACTGGAAGGAGATTCTCAAAGTACAAGTTCAAATGTCTTATTTAAGGACTTCCCAAGTGAGATTTTTGAATACTTTGAGCACATTCCAACCTCATCACAACAATGA 909 0.44 MEGEFDRGCIKKGPWSSEEDEVLLRHVNKYGPREWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFTAEEERVVIELQARFGNKWAKIATYLHGRTDNDVKNFWSSRRKRLERMLRRPPTLKPQKNKGKTPLNQVQVEKVPPCSSNQVEENLSYPTSYMGNTELFEMINLPDLIKPNYQHWESDPLSAVEVDATPLHTVPSFESSSGYNFPPLPEPLMDFPLFPECQDLVPEPFDPNFIDGFEQKKCSECLCSSQKLGTSMPSLGLEGDSQSTSSNVLFKDFPSEIFEYFEHIPTSSQQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6412g00002 302 FunFam MYB transcription factor 12 64 - -
Mupr6412g00002 302 Gene3D - 11 64 - -
Mupr6412g00002 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Mupr6412g00002 302 MobiDBLite consensus disorder prediction 117 136 - -
Mupr6412g00002 302 SMART sant 65 113 IPR001005 -
Mupr6412g00002 302 SMART sant 11 61 IPR001005 -
Mupr6412g00002 302 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Mupr6412g00002 302 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Mupr6412g00002 302 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
Mupr6412g00002 302 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mupr6412g00002 302 CDD SANT 14 59 IPR001005 -
Mupr6412g00002 302 CDD SANT 68 107 IPR001005 -
Mupr6412g00002 302 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Mupr6412g00002 302 FunFam Transcription factor GAMYB 67 135 - -
Mupr6412g00002 302 Gene3D - 67 141 - -
Mupr6412g00002 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Mupr6412g00002 302 PANTHER TRANSCRIPTION FACTOR DUO1 6 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6412g00002 Mupr-Chr6412 9608 11364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6412g00002 10 298 MYB Transcription Factor Family AT3G60460 42.122 2.32e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6412g00002 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6412g00002 K09422 - gmx:121173231 510.375