Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6410g00004 ATGAAGCTCCAAACACGACAACATCCTTTTCTACTCTCCATTGTCTTGTTCTCCGCTGTCATCTCCACAATTGCAGCAACCACCACCATCTCACCGGGCACAACCCTCTATGCTTCCAACACAACCCAATCATGGTCCTCTCCCAACAACACTTTCTCTCTCCATTTCCTTCCCTTCCTCCCTCCAACTTCCCCTCCTTCCTTCACCGCCGCCATTGTCTACTCCGGTGGCGCCCCCGCCATCTGGTCCGCCGGAAACGGCGCCACCGTGGACTCCGCCGGCTCCCTCCGCTTCCTTCCCGCCGGCAATCTCGTCCTCGTTAACGGGTCGGGCTCCACCGTGTGGGACTCTGGAACTTCCGACATGGGAGTCTCCTCCGCCACGCTTCACGACAATGGAAACTTGGTTCTCTCCAATGCCACCGGTTCCGTGTGGTCGAGCTTCGACAACCCCACTGACACCATTGTGCCGTTTCAGAACTTCACCGTTGGTATGGTTTTGCGTTCTGGGTTGTTCTCGTTTTCCGTTCTTAGGTCTGGGAATCTCACCCTCAAGTGGAGTGATAGTGTGCCTTACTGGGATCGAGGCTTGAACTCTTCCATGAGTTTGGTGAATTTGAGTTCACCGGTTTTGGGGCTGGAATCGAGGGGGGTTTTGCAGCTTTTTTATCCCAATTTGAGTGCTCCTGTGGTGGTTGCTTATAGCAGTGACTATGGTGAAGGGAGTGATGTGTTGAGGGTTTTGAAGTTGGATGGTGATGGGAATTTGAGGGTTTATAGCACTAAGAGGGGTAGTGGGACTGTGATGGCAGGATGGGTTGCTGTTAAGGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATGGTGTTTGTAGTTACAATGATTCTAATTCTAGCCCCATTTGTGGATGTCCATCTCAGAATTTTGAGATGGTTGATCCTAGTGATAGTAGGAAAGGGTGTAGGAGGAAGGTGAGTCTTGAGGATTGTGTGGGGAAGGTGGCGATGTTGCAAGTTGACCATGCTCGATTCTTGACTTATCCTCCTCAGTTTTTGATCAATCCCGAGGTGTTTTTCATTGGTATGTCAGCTTGCAGTGGAAATTGTCTTTCTGCTAGTGCTTGTTTTGCTTCCACTTCCTTGTCTGACGGAAGTGGACTTTGTTACATAAAGACATCAACTTTTATTAGTGGCTACCAGAATCCTGCCCTACCTAGCACTTCTTATATCAAGGTTTGTGGACCATTGGCTCCAAACTCGGCACCTTCGTTGGAGAATGCGGATTGGAGGGTACCTGGTTGGTTAGTAGCTCTTGTTGTTTTGAGTACCCTTTTGGGTTTCCTTGTCTTTGAGGGTGGTTTATGGTTGTGGTGCTGTAGAAACAGGCAAGTATTTGGAGGGTTTGCTGCTCAGTATACTCTTCTTGAGTATGCTTCTGGTGCTCCGGTTCATTTCTCTTATAAGGAGCTTCAAAAGTCAACGAAAAGGTTCAAGGAGAAACTAGGTGATGGGGGGTTTGGTGCCGTTTATAAAGGAACTCTTGCTAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGGCATTGAGCAGGGAGAGAAACAGTTTAGGATGGAAGTTTCTACCATTAGTAGTACCCATCATCTAAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACAGGCTTCTAGTATACGAGTTTATGAAGAATGGATCTCTTGATAATTTTCTTTTTGTTAATGAAGAACAACAGTCAGGAAAATTGTTGAACTGGGGGTATAGATTCAACATTGCCCTAGGTGCTGCTAAGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCGGATTTTGGTCTTGCAAAGCTCTCGAGTCCAGTGGACCACAGGCACCGAACCTTGACAAGTGTGAGAGGAACCAGAGGGTATTTAGCTCCGGAATGGCTAGCAAATCTTCCCACAACTTCTAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAAAAGGAACTATGAAATCTCAGAAGAAACAAGTAGAAGAAAGTTTTCCATCTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTTATTGACAGAAGACTGGCTAGCCAAGAAATCAACTTGGAGCAAGTGAAAAGAGTGCTTCTGGCATGCTTTTGGTGCATACAAGAACAACCATCTCATAGGCCAGCTATGAGCAAAGTTGTGCAAATGCTAGAAGGTGTGACAGATATTGAGAGGCCACCAGCCCCAAAAATCAACAGCAATGCCACTGCTATTTCCACCTTTGCCACATCATCAGCTCCAACTTACTCCTCATCTTCATCTTTGTTTACTTTTGAGGCTTCTCCCTTGGCTTTTGAAGGAGCACAGAGAACATTACTTCATCCCTTATAA 2490 0.4598 MKLQTRQHPFLLSIVLFSAVISTIAATTTISPGTTLYASNTTQSWSSPNNTFSLHFLPFLPPTSPPSFTAAIVYSGGAPAIWSAGNGATVDSAGSLRFLPAGNLVLVNGSGSTVWDSGTSDMGVSSATLHDNGNLVLSNATGSVWSSFDNPTDTIVPFQNFTVGMVLRSGLFSFSVLRSGNLTLKWSDSVPYWDRGLNSSMSLVNLSSPVLGLESRGVLQLFYPNLSAPVVVAYSSDYGEGSDVLRVLKLDGDGNLRVYSTKRGSGTVMAGWVAVKDQCEVFGYCGNNGVCSYNDSNSSPICGCPSQNFEMVDPSDSRKGCRRKVSLEDCVGKVAMLQVDHARFLTYPPQFLINPEVFFIGMSACSGNCLSASACFASTSLSDGSGLCYIKTSTFISGYQNPALPSTSYIKVCGPLAPNSAPSLENADWRVPGWLVALVVLSTLLGFLVFEGGLWLWCCRNRQVFGGFAAQYTLLEYASGAPVHFSYKELQKSTKRFKEKLGDGGFGAVYKGTLANQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVNEEQQSGKLLNWGYRFNIALGAAKGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLSSPVDHRHRTLTSVRGTRGYLAPEWLANLPTTSKSDVYSYGMVLLEIVSGKRNYEISEETSRRKFSIWAYEEFEKGNIMGVIDRRLASQEINLEQVKRVLLACFWCIQEQPSHRPAMSKVVQMLEGVTDIERPPAPKINSNATAISTFATSSAPTYSSSSSLFTFEASPLAFEGAQRTLLHPL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6410g00004 829 ProSiteProfiles EGF-like domain profile. 275 315 IPR000742 -
Mupr6410g00004 829 Gene3D - 22 149 IPR036426 -
Mupr6410g00004 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 197 IPR036426 -
Mupr6410g00004 829 CDD STKc_IRAK 501 772 - -
Mupr6410g00004 829 Gene3D Transferase(Phosphotransferase) domain 1 570 789 - -
Mupr6410g00004 829 Pfam D-mannose binding lectin 82 163 IPR001480 -
Mupr6410g00004 829 CDD B_lectin 29 151 IPR001480 -
Mupr6410g00004 829 Pfam Protein kinase domain 498 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6410g00004 829 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Mupr6410g00004 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 150 - -
Mupr6410g00004 829 FunFam S-receptor-like serine/threonine-protein kinase 469 569 - -
Mupr6410g00004 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 780 - -
Mupr6410g00004 829 ProSiteProfiles Protein kinase domain profile. 495 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6410g00004 829 Pfam S-locus glycoprotein domain 241 305 IPR000858 GO:0048544
Mupr6410g00004 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 151 274 - -
Mupr6410g00004 829 Gene3D - 150 268 IPR036426 -
Mupr6410g00004 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mupr6410g00004 829 Gene3D Phosphorylase Kinase; domain 1 469 569 - -
Mupr6410g00004 829 ProSiteProfiles Bulb-type lectin domain profile. 21 150 IPR001480 -
Mupr6410g00004 829 PANTHER OS07G0415500 PROTEIN 12 782 - -
Mupr6410g00004 829 PIRSF SRK 2 817 IPR024171 GO:0004674
Mupr6410g00004 829 SMART blect_4 36 151 IPR001480 -
Mupr6410g00004 829 SMART serkin_6 495 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6410g00004 829 SUPERFAMILY Protein kinase-like (PK-like) 478 771 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6410g00004 Mupr-Chr6410 28126 30615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6410g00004 434 780 Receptor kinase-like Gene Family AT5G20050 39.071 1.58e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mupr6410g00004 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6410g00004 - - gmx:100810753 1435.24