Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6410g00003 ATGGCCGGCAATCCCACCGCCACTACCTCATCCGCGTTATCTCCCGAGAAATTCAATTTCTCGCCCGATTACCCCTCCCGAATCACCCTCACTTCGGATCAGGTCAACCACTGCTCCCGAGCCCTCAACCTTTTGAAGGAGAAACTCCACACTCCTCACGTGATCACTCAGGAGTTCTCACACTTGCAGGCGAACAGGATAACACCGAGTGAGATGAGGAGAAGGTGCACCCTCGCTCTTGACGCTGTCAATTCGAGCAAGAATCGATACTCGGACGTTTTACCATTTGACAACAACAGGGTTGTTCTAAAATCAAGTACAGATTATAGACCTGCAGCACAGGGGTATATCAATGCAAGCTTTGTCTCGACCTCCTCCCCTGGAAATGTGTCCCAGTTTATAGCCACACAAGGTCCACTTCCACATACTTATGAGGATTTTTGGGAAATGATTATCCAATATCACTGCCCTGCGGTTATCATGCTTACTAGGTTGGTGGACAATTACCAGTTGGTAAAGTGTGGAGATTATTTTCAAGCTGAGGATGGACCTAGGGAAGTTGGTAATATCTCTATTATTGGTAAATGGGTGAATACTACTGAAACTTCACTGGTGCTGCGCCATTTAGAGGTCAACCATAGAGAGGTAGAAGATGTACCACTATCTGTTTTGCATATTCAGTATCCTGAATGGCCCGACCATGGAGTTCCCAAAGACACATTTGCTACACGTGAAATTTTGAAAAGATTATACCATTTACCACCAAACCTTGGCCCAATAGTGGTTCATCTCATTCCTTATTCTTCTTTGTTTATTCACTTCATAGAAGTGATGATGATAACTCACATGCATATATGTCTGAGACAAACTCTCTCACTCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTGTAGATATTGCTAACACAATAGCTGCGTTCAGGTCCCAGCGTATTGGAATGGTCCAGACCAAGGATCAGTACATTTTCTGCTATAAAGCTATCATAGATGAACTGGAAGACCTTGCAGGGGAAAGCTGA 1089 0.4435 MAGNPTATTSSALSPEKFNFSPDYPSRITLTSDQVNHCSRALNLLKEKLHTPHVITQEFSHLQANRITPSEMRRRCTLALDAVNSSKNRYSDVLPFDNNRVVLKSSTDYRPAAQGYINASFVSTSSPGNVSQFIATQGPLPHTYEDFWEMIIQYHCPAVIMLTRLVDNYQLVKCGDYFQAEDGPREVGNISIIGKWVNTTETSLVLRHLEVNHREVEDVPLSVLHIQYPEWPDHGVPKDTFATREILKRLYHLPPNLGPIVVHLIPYSSLFIHFIEVMMITHMHICLRQTLSLSAGIGRTGTYCTIHNTIQRILAGDMSAVDIANTIAAFRSQRIGMVQTKDQYIFCYKAIIDELEDLAGES 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6410g00003 362 Gene3D Protein tyrosine phosphatase superfamily 28 356 IPR029021 -
Mupr6410g00003 362 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 48 357 - -
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 115 122 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 288 306 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 221 238 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 321 336 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 337 347 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 PRINTS Protein tyrosine phosphatase signature 133 153 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 SMART PTPc_3 54 356 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 ProSiteProfiles PTP type protein phosphatase domain profile. 55 354 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 SMART ptp_7 222 353 IPR003595 -
Mupr6410g00003 362 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 294 345 IPR000387 GO:0016311|GO:0016791
Mupr6410g00003 362 Pfam Protein-tyrosine phosphatase 294 352 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 Pfam Protein-tyrosine phosphatase 84 263 IPR000242 GO:0004725|GO:0006470
Mupr6410g00003 362 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 45 355 IPR029021 -
Mupr6410g00003 362 CDD PTPc_plant_PTP1 116 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6410g00003 Mupr-Chr6410 22751 27419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6410g00003 33 360 Protein tyrosine phosphatase (PTP) family AT1G71860 62.195 9.98e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6410g00003 - - gmx:548044 585.874