Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6410g00002 ATGGCTGCCGATACATCCTCTGTGTTTTCTCCCGAGAAATTGAATTTCTCGCTCGATGATCCTTCCCCAATTTCCTTGACTTGCGATCAGGTGAAGCACTGCAACGAAGCTCTGACCTTATTGAAGGACAAGTTCGATCGCGCTCCTCACAAGATCGCCGACGAGTTCGATCTCTTAGAGGCTAACAGAGTAACACCAACTGAGACCAATAAAAGATGCGCCATAGCTCTTGAGCCTCTCAATGTTACCAAAAATCGACACGACGACGTTTTACCACTTGACGAGAATAGGATTATTCTGAAGTCAACGGGGGGTTATGTGAACGCAAGCCTAATCTCGCAACACAAGGTCCACTTGAAAAGACTTACGAGGATTTCTGGGAAATGGTTATTCAACATCACTGCCCTAAAAGGGATGAAAATTAGTGAAACTTCGCCGCTGGTATTGAGCCATTTTGAGGTCAACCATAAAGATCAGGTACAAGATAGGCCATTATCTGTTTTGCATATTCACCATAGTAAATGGCCTGACCATGGAGTTCCCGATGATACATCTCCTGTTCGTGATATTTTTAAAAGATTATTTCATTTACAACCAAACCTTGGCCCTATAGTGGTGCACTGCAGACAAACTCGCTCTCTCAGTGCCGGTATTGGTAGAACTGGAACATACTGCACCATTCACAACACAATTCAGAGAATACTTGCCGGTGATATGTCTGCTGTAAATATTGCTGAAACTGTGGCTGCCTTCAGGACCCAGCGTCTTAGAATGGTCCAGACCAAGTTATGTTACAGCTCTGTATATAAGTAG 813 0.4403 MAADTSSVFSPEKLNFSLDDPSPISLTCDQVKHCNEALTLLKDKFDRAPHKIADEFDLLEANRVTPTETNKRCAIALEPLNVTKNRHDDVLPLDENRIILKSTGGYVNASLISQHKVHLKRLTRISGKWLFNITALKGMKISETSPLVLSHFEVNHKDQVQDRPLSVLHIHHSKWPDHGVPDDTSPVRDIFKRLFHLQPNLGPIVVHCRQTRSLSAGIGRTGTYCTIHNTIQRILAGDMSAVNIAETVAAFRTQRLRMVQTKLCYSSVYK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6410g00002 270 SMART PTPc_3 51 270 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 Gene3D Protein tyrosine phosphatase superfamily 24 126 IPR029021 -
Mupr6410g00002 270 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 39 116 - -
Mupr6410g00002 270 ProSiteProfiles PTP type protein phosphatase domain profile. 52 270 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 Pfam Protein-tyrosine phosphatase 140 270 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 Pfam Protein-tyrosine phosphatase 81 116 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 Gene3D Protein tyrosine phosphatase superfamily 127 270 IPR029021 -
Mupr6410g00002 270 PRINTS Protein tyrosine phosphatase signature 209 227 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 PRINTS Protein tyrosine phosphatase signature 258 268 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 PRINTS Protein tyrosine phosphatase signature 105 112 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 PRINTS Protein tyrosine phosphatase signature 242 257 IPR000242 GO:0004725|GO:0006470
Mupr6410g00002 270 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 215 266 IPR000387 GO:0016311|GO:0016791
Mupr6410g00002 270 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 269 IPR029021 -
Mupr6410g00002 270 SMART ptp_7 166 270 IPR003595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6410g00002 Mupr-Chr6410 13881 19060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6410g00002 29 268 Protein tyrosine phosphatase (PTP) family AT1G71860 43.434 1.14e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6410g00002 - - gmx:548044 263.848