LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6405g00002	ATGTTCCTCATGCAAACTCCAACACCCCATGCAGCAGGAGGAGGCTCCGCCGTCGTCGCCGTCAGCGGCGGCCGACATAGCCATTCTGCCGTCAAATGGGCGGTGGACCACCTCCTAAAGAAGAACTCCTCATGCATCCTTATTCATGTTCGAACCATGACCATGCATCCCCATGATGCTATTGACGTACCTAAACATGGTCGTCCACCAACTGAAGAAGAATTGCACCAATTCTTTCTTCCCTTCAGAGGGTTTTGTGCCAGAAAAGGGATCACAACAAAGGAATTGATCCTGCATGACCTTGATGTTCCAAATGCGCTTACTGATTACGTGGTTGAAAATTGTATCAACACTGTTGTTGTTGGTGCTGATACTTCCGCTTGGAATACTCTTATAAGGAGATTTAATAAGGATGCAGATGTGGCAACTAGTTTAGCAAAGTCTTTGCCAGATACTTGTAGTTTATATGTTGTATCAAAAGGAAAAGCACAGCATGTTCGACCAACAGGTCGTCATCATTATCATCATCTTATTAACGTCACACCAACTAAATCTATAAGAGACATAGTCACTCTCTTGGAAAATGCTCCATTGGTTCATCCACATAAGAATCTTGCCGATCCCCCTGCAGATTCTGATGATATAGACGGGAAACCAATGAAAGATGCAATTGGGCGAGACTCCAACAATTTTTGGAAATCTTTACGTGAAATAAAAGAGGCCTTACTAACAACATCACATAAGTCCAATGAAGATACCAATTCACCAAGAGGTCCAGCAGAATACTCCTCCTCATCACAAGATTCATCAGCTAGGAGTTCTCCTGCAAACAGTGACAGCACAGGGCAACTGCTTGGTCCTCCTTTGATTGATAAGTTACATGGAAACCATGAAGTAGTTGTAAACTCAGACAAGCCTAAGGGCATCTCTTCTACGAAACCCCTAGTAAACTTAGAGATGGAAATGAGAAAACTGAAACTAGAACTGAGGAAAACAACGGAGAATTATGGTATGGCTTGCAAAGAAGCTGTTTTAGCAAAGCAGAAGGTAACGGAGCTTCAAAAATCTAGGCAAGAAAAGGAACGCAATGTAGAGGAAGCTAAGCTTGCCGAAGAGGCTGCATTGGCTTTGGCAGAGGTGGAGAGGCAGAAAGCCAAAACGGCTATGGAGTCAGCAGAAATGTCACAGCGCCTGGCGGAATTGGAAACTCAAAAGAGAAAGGAAGTGGAACTAAGAGCGAAGCAGGAGGAAGAAGAGAGGAAGAAAGCATTGCATGAGGTTGTGTGTAATAGTATTCCATATAGAAGATACAAAATTGAAGAAATTGAGGCAGCGACAAATAACTTCGACAAATCTTTGAAAATTGGTGAAGGTGGATATGGACCTGTTTTTAAAGGAGTGCTTGATCACACTGTTGTTGCCATTAAGGCGGTGAGACCAGACATAGTCCACGGAGAGAAGCAATTTCAACAAGAGGTAATTGTTTTGAGCACCATAAGACATCCAAGCATGGTGCTTCTCCTAGGAGCATGCCCGGAATTCGGATGCCTTGTGTATGAGTACATGGAAAACGGAAGTTTAGAAGACCGACTCTTCCAGAAAGACAAGACACCACCAATTCCATGGAAAACACGTTTCAAAATCGCGTCAGAGATTGCCACTGGACTTCTTTTCCTACACCAAACAAAGCCGGAACCCCTGGTGCACCGGGACCTGAAGCCGGCAAATATACTCCTGGACAAGAACTACGTGAGCAAGATAAGCGACGTGGGTTTGGCGAGGCTGGTGCCCCCTTCCGTGGCGGACAAAACGACGCAGTATCGATTGACGGGTGCGGCCGGAACGTTTTGCTACATTGATCCGGAGTATCAGCAGACGGGGCTGTTGGGTGTAAAATCAGACATATACTCGTTGGGTGTGGTGCTGCTGCAGATCATTACGGGAAAGGCTCCTATGGGTTTGTCGCACTTGGTTGAGAATGCCATTCACAAAGGCACTTTCGCTGATGTTCTTGATCCTAGTCTCACTGATTGGCCTCTCCAAGACGCTTTGTCGTTTGCCAAGCTCGCCTTGAACTGTTGTGAGTTGAGGAAACGCGACAGACCGGATCTTGCTACTGTCGTTTTGCCTCAACTCAATCGATTATCGGGGATATGGGACTCCAATTCTCCTACATATTATTATCATCACTCTGGTCCTATTAATCTCTCTTTAACTTGA	2220	0.4518	MFLMQTPTPHAAGGGSAVVAVSGGRHSHSAVKWAVDHLLKKNSSCILIHVRTMTMHPHDAIDVPKHGRPPTEEELHQFFLPFRGFCARKGITTKELILHDLDVPNALTDYVVENCINTVVVGADTSAWNTLIRRFNKDADVATSLAKSLPDTCSLYVVSKGKAQHVRPTGRHHYHHLINVTPTKSIRDIVTLLENAPLVHPHKNLADPPADSDDIDGKPMKDAIGRDSNNFWKSLREIKEALLTTSHKSNEDTNSPRGPAEYSSSSQDSSARSSPANSDSTGQLLGPPLIDKLHGNHEVVVNSDKPKGISSTKPLVNLEMEMRKLKLELRKTTENYGMACKEAVLAKQKVTELQKSRQEKERNVEEAKLAEEAALALAEVERQKAKTAMESAEMSQRLAELETQKRKEVELRAKQEEEERKKALHEVVCNSIPYRRYKIEEIEAATNNFDKSLKIGEGGYGPVFKGVLDHTVVAIKAVRPDIVHGEKQFQQEVIVLSTIRHPSMVLLLGACPEFGCLVYEYMENGSLEDRLFQKDKTPPIPWKTRFKIASEIATGLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVADKTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKAPMGLSHLVENAIHKGTFADVLDPSLTDWPLQDALSFAKLALNCCELRKRDRPDLATVVLPQLNRLSGIWDSNSPTYYYHHSGPINLSLT	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6405g00002	739	MobiDBLite	consensus disorder prediction	244	291	-	-
	Mupr6405g00002	739	MobiDBLite	consensus disorder prediction	247	284	-	-
	Mupr6405g00002	739	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	124	-	-
	Mupr6405g00002	739	SUPERFAMILY	Protein kinase-like (PK-like)	428	708	IPR011009	-
	Mupr6405g00002	739	Gene3D	Phosphorylase Kinase; domain 1	428	521	-	-
	Mupr6405g00002	739	Gene3D	Transferase(Phosphotransferase) domain 1	522	722	-	-
	Mupr6405g00002	739	ProSiteProfiles	Protein kinase domain profile.	449	712	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6405g00002	739	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	567	579	IPR008271	GO:0004672\|GO:0006468
	Mupr6405g00002	739	MobiDBLite	consensus disorder prediction	200	222	-	-
	Mupr6405g00002	739	PANTHER	OS02G0152300 PROTEIN	17	718	-	-
	Mupr6405g00002	739	Pfam	Protein kinase domain	451	706	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6405g00002	739	CDD	STK_N	16	161	-	-
	Mupr6405g00002	739	SMART	serkin_6	449	712	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6405g00002	739	Gene3D	HUPs	17	155	IPR014729	-
	Mupr6405g00002	739	MobiDBLite	consensus disorder prediction	206	222	-	-
	Mupr6405g00002	739	Coils	Coil	315	335	-	-
	Mupr6405g00002	739	Coils	Coil	343	426	-	-
	Mupr6405g00002	739	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	421	521	-	-
	Mupr6405g00002	739	FunFam	Os07g0541700 protein	522	612	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6405g00002	Mupr-Chr6405	8983	13150	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6405g00002	13	728	Receptor kinase-like Gene Family	AT1G78940	46.658	0.0	612

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Mupr6405g00002		Pkinase	8.3e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6405g00002	-		-	gmx:100799611	1110.13