Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6393g00003 ATGACGTCACACTCACACTACCCACCCGACTTAGACGCCGACTCCGTCACCTCCTCCCCTCGCTCCGACCACTTCCACGACGCCCCGCCACGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCGTCCCCCGCCCTCACGACAACCAGCTTCGATACGTCGGCGGCGACACCCGAATCGTCGCCGTCCACCGCTCCATCTCCTTCTCCGCCCTCATTCTCAAGCTCTCCAAACTCTCAGGCACGAGCAACATAACCGCCAAGTACCAGCTTCCGAACGAGGATCTGGACGCGTTGATCTCGGTCACGACAGACGAGGATGTGGAGAACATGATGGACGAATACGACCGCGTGGCACAGAATCATAACCCGCGATCGGCTCGGCTTCGGCTCTTCCTCTTTCCCGAAGGGGAAGACTCTCGAGCCAGCAGCATCAGCTCGCTCCTAAACGGCTCAACCAACCGCGAGAACTGGTTCCTCGACGCCTTAAACGGTGGCGTTTCGGGGCTCGAGCGAGGCCGCTCAGAAGCCTCTTCCATGGTCTCGGAAGTACCCGATTACCTTTTCGGGTTGGATACCTCCGAAGAAACACACCAACACCAACGCGAACCGCGACCCAAGGACCGACCCGTTCTCCACGACAACGTTTCCGTTTCGGATCCGGGTTCGCCCGCCCCGGTCGTCTCGTCCCCGTATTGCTCCACGTCATCAGCGCCGTGCGTACCTTCTATCCCGAACCTTCCCCCGGTTAAAACTAAACTCACAAACCCGGTTCCTGATACGGACTCCAAGGGAAATAAAATCGAACCTGAAATGGAGGTTCAACCGAACCTGAACCCGAACCCGAACCTGTACCCGGGTAACCCTGTAGTACACTACCCTCAAGAAGCTGCTTATTCGGGTCATTCAGTAAACCCGGTTCCTGTTTACTACGTTTCAGGTCCGGTTCGACCGGGAACTGTGCCGGTTCCTATGCAGACACCCTATCCCTACGTTCAGCAACCATATAATCATGCAGTGGTACCATCTCAGGTTCCACTAGGGTACCATCATTTGGTTCCGGGTTCGGGTCAGCTATATGGCCCAGGGGTGAGGCACGTGACCCCACTGCAACACCCTTATAGTCCTTCCGCCACAATGGTTCAGGACGGTTTGAAACAGCACGTGTATCATGCCGTGCCGAATTCCGGTCCCGTTCACCCGGCGATGGTGATGGCGATGACGGGTGGGGATGAACGGCAGAGAGGTGGAGCGGAGTTCATGGCGGGTCGGGGCTCCAACTCGCTAAATAACTGA 1296 0.5756 MTSHSHYPPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKIVPRPHDNQLRYVGGDTRIVAVHRSISFSALILKLSKLSGTSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNHNPRSARLRLFLFPEGEDSRASSISSLLNGSTNRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDTSEETHQHQREPRPKDRPVLHDNVSVSDPGSPAPVVSSPYCSTSSAPCVPSIPNLPPVKTKLTNPVPDTDSKGNKIEPEMEVQPNLNPNPNLYPGNPVVHYPQEAAYSGHSVNPVPVYYVSGPVRPGTVPVPMQTPYPYVQQPYNHAVVPSQVPLGYHHLVPGSGQLYGPGVRHVTPLQHPYSPSATMVQDGLKQHVYHAVPNSGPVHPAMVMAMTGGDERQRGGAEFMAGRGSNSLNN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6393g00003 431 SUPERFAMILY CAD & PB1 domains 47 143 - -
Mupr6393g00003 431 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Mupr6393g00003 431 CDD PB1_UP2 35 134 - -
Mupr6393g00003 431 Gene3D - 52 135 - -
Mupr6393g00003 431 PANTHER OS05G0427100 PROTEIN-RELATED 13 345 - -
Mupr6393g00003 431 SMART PB1_new 46 136 IPR000270 GO:0005515
Mupr6393g00003 431 MobiDBLite consensus disorder prediction 195 214 - -
Mupr6393g00003 431 MobiDBLite consensus disorder prediction 195 230 - -
Mupr6393g00003 431 MobiDBLite consensus disorder prediction 1 28 - -
Mupr6393g00003 431 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6393g00003 Mupr-Chr6393 47620 49086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6393g00003 21 178 MAP Kinase Kinase Kinase AT3G46920 39.623 2.09e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6393g00003 - - gmx:100806717 703.745