Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6393g00002 ATGGCTAAAAAACCCAAGGGGGAAGACGCGGAGGAGCCTCTGCCGGACCACCTCCGGTGTGGGCGCACCGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTGAAGGACAATCTGAAGCTGTGCGAGATTCACTATCTCCAAGGCCGCCATCGCCAGTTCAAGGAGAAGGTTCCCGAGTCGCTGAAGCTTCAGCGAAAGCGCAAGACCAACGAGGAGCCCGAGCCCAATGCTCTGGACAATGTGGAATCTAGGGCACGGAGAACCTCGGTAATCGCGAAGAAGAAACGCAGGGTTTCGGAGGGTTCGGAGGCGCAGGCGCTGGTCGTGGCTGGTGGTTCTTCGTCGAGGAAGAAAGCGCTGAAGCAAGGCGATATGCAGTTGGAGCTCTTGAGAATGGTTCTGAAGAGAGAGGCCGAGAAGAAGAACAACAACAAGAAGAGCATGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAAGAAGGAGGGGGAAGAGGAATTGCATTACAGTAAAGGAGAGTTGAGGAGGGAATTGCCCAACGGTGTAATGGAAATCTCTCCGCCTACTCGCGACTACAACAATGTGGGTTCGCATTGTGACGTTAAAGTGGGTGTTGATTGCAGAACTGTTGCTCCGCGTTACTTTAGGTCCAAGAATGTTGATAGGGTCCCTGTGGGGAAGTTGCAGATTGTGCCGTATGGATCAAACTTGAAGAAGGGTAAGCGGAAGAAGTGTCATTGGTGCCAGAGAAGTGAATCTTCGAATCTCATTCAGTGTTCGAGCTGTCAGAGGGAGTTTTTCTGCATGGATTGCATCAAAGAGCGGTACTTTGACTCTCAAAATGAATTTGTCGTGGAACTTGCACTTGCAAGCATTGCTGTGCAAGTCAATGTAAAGACAGTGAAAGAAAATTTGACTGGTAAAAGCAGAGTTGATAGAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCAAATAAGTGAAGATCAGAATATTGAGCTAGAAACAGAAGCAAAAATTAGTGGTATTTTTTGTTCTTTTAATATTGATGGAAAAATATTTCAGATATTCAAATCAAGCAGGTGGAATTTGGCTGCAATGAGAAAAATTACTGGTAAGTTCTCTTCTACAGGTGCTATTGAGAAAAGAGACATGATTTTCTGGTGCTACTTGTTAACTAATGTAACACTTGTCCCAGCAATCACTGCAAAACACCCATTTTGGATCTCCATAGAAGCTGTCCTAGAATTAAGTCAAGGAAAAGCTTCTGGAGAAATTAACTCATCTATGTTCAAGCTACCTGATAAAATGAAAGCTTGCAGTGTTATTGAGAGCCATACTTCAGATGAGAAAGTCATATCTGGTGGCAATTTATCTGATACTTCAATATTCCCTGAGTGGACAAATTGTAATGGCATTGATAGTCTATCATGCCCTCCTACAGAGCTTGGTGGTTGCAGTAATAGGCACCTTGAGTTGAGATCCATTTTCCCCTCCAGCTGGATCAAAGAGATGGAAGTAAAGGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACATCAGATAAAAGTTCAAGCTGCTCATTGTGTTTTGACACTGACCACGGTACTAACAGATACAAGCAGTTGCAAGAATCAGCTTTAAGAGAAGATTCCAATGATAATTACTTGTTTTGCCCCACAGTAACGGACATCAGTGGTGATAACTTCGAGCACTTTCAGAAACACTGGGGAAAAGGCCACCCTATAGTTGTCCGAGATGTGCTCCAAAGTACATCAAACCTCAATTGGGATCCACTGATCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAGATATGAGAATAATAAAGACTTACTTGAATCTTGTTTGGATTGGTGGGAGGTGGAAATTAACATTAGGCAGTACTTTACTGGGTCTGTCAAGCGTCGTCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTAAAGGGGTGGCTGTCTTCCCAAATATTCAGAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCAGTTCAAGAATACATGCATCCCTTGTCTGGTCTCCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCAAAACATGACATTGGGCCATATGTCTATATTTCTTATGGCTCTGCTGACAAAGAAACCGATTCTGTGACAAAGCTCTGCTATGACTCATATGATGTGGTTAATATTATGACCCATACCACGGATGTCCCCCTCTCTACAGAACAGCTTACGAAAATAAGAAAATTACTTAAAAAGCACAAAACTCTGTGTCAAATGGAGACTATTGCTACTGAGGAGCAACAGGAACAGAAAGTGAATGGAATGGCATTATTGCGTGCAGAAGAAACGGAGCGAAAAGGCTTGCAGAGTATGGTTGAAGAAGGAATGAACTTTTTCAGGAGAGTCAATAGAACATCTTGCATCTCAGCTGAAGCTAAAAAAGTTGGTAATCAGAGCACAGACAGCAATATTTCCCAGAATGGAGAATGTGATTTCTTTTCTGATTCTGATTCTGATTCTGGACCTGCATTACTTCTCCATGGGACTGTTCAAACTACTGAATTGTCTAAACATGATAATCCTAGAAATCCCTTTGAAAGTTCACAAAGAAATAAAATTAAGTTTGCCAAGAATTTGGGTGCCCAGTGGGATGTCTTTCGTAGACAAGATGTACCAAAGCTCATAGAATACCTTAAAAGACACTATGATGAATTTCCTTATACCCACGACTATGACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAGTACTCACAAAATGAGACTAAAGGAGGAATTTAAGATTGAACCATGGACTTTTCAGCAACACGTTGGACAAGCTGTCATTATTCCTGCTGGATGTCCATACCAGATCAGGAATACTAAGTGTTGTGTTCATGCGGTATTGGAATTTGTGTCCCCTGAAAATGTTACCGAGGGTTTCCAGTTGATTGATGAGGTCCGACTATTGCCTAAAGATCATATAGCAAAAGCAGACATGCTGGAGGTAAAGAAAATGGCGCTTCATAGCATGAATACAGCAATTAAAGAAGTACGTCAGCTTACAAGCAAAACATGA 3141 0.4257 MAKKPKGEDAEEPLPDHLRCGRTDGRQWRCRRRVKDNLKLCEIHYLQGRHRQFKEKVPESLKLQRKRKTNEEPEPNALDNVESRARRTSVIAKKKRRVSEGSEAQALVVAGGSSSRKKALKQGDMQLELLRMVLKREAEKKNNNKKSMKKNKKKNKKKKKEGEEELHYSKGELRRELPNGVMEISPPTRDYNNVGSHCDVKVGVDCRTVAPRYFRSKNVDRVPVGKLQIVPYGSNLKKGKRKKCHWCQRSESSNLIQCSSCQREFFCMDCIKERYFDSQNEFVVELALASIAVQVNVKTVKENLTGKSRVDRILHFHYLICMLLPVLKQISEDQNIELETEAKISGIFCSFNIDGKIFQIFKSSRWNLAAMRKITGKFSSTGAIEKRDMIFWCYLLTNVTLVPAITAKHPFWISIEAVLELSQGKASGEINSSMFKLPDKMKACSVIESHTSDEKVISGGNLSDTSIFPEWTNCNGIDSLSCPPTELGGCSNRHLELRSIFPSSWIKEMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDHGTNRYKQLQESALREDSNDNYLFCPTVTDISGDNFEHFQKHWGKGHPIVVRDVLQSTSNLNWDPLIMFCTYLEQSITRYENNKDLLESCLDWWEVEINIRQYFTGSVKRRPQRNTWHEMLKLKGWLSSQIFREQFPAHFAEVIDALPVQEYMHPLSGLLNLAANLPHGSAKHDIGPYVYISYGSADKETDSVTKLCYDSYDVVNIMTHTTDVPLSTEQLTKIRKLLKKHKTLCQMETIATEEQQEQKVNGMALLRAEETERKGLQSMVEEGMNFFRRVNRTSCISAEAKKVGNQSTDSNISQNGECDFFSDSDSDSGPALLLHGTVQTTELSKHDNPRNPFESSQRNKIKFAKNLGAQWDVFRRQDVPKLIEYLKRHYDEFPYTHDYDKKMVHPILDQSIFLDSTHKMRLKEEFKIEPWTFQQHVGQAVIIPAGCPYQIRNTKCCVHAVLEFVSPENVTEGFQLIDEVRLLPKDHIAKADMLEVKKMALHSMNTAIKEVRQLTSKT 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6393g00002 1046 MobiDBLite consensus disorder prediction 158 172 - -
Mupr6393g00002 1046 SUPERFAMILY Clavaminate synthase-like 567 1032 - -
Mupr6393g00002 1046 MobiDBLite consensus disorder prediction 59 89 - -
Mupr6393g00002 1046 ProSiteProfiles JmjC domain profile. 694 1009 IPR003347 -
Mupr6393g00002 1046 MobiDBLite consensus disorder prediction 1 22 - -
Mupr6393g00002 1046 Pfam WRC 15 56 IPR014977 -
Mupr6393g00002 1046 Coils Coil 131 165 - -
Mupr6393g00002 1046 FunFam Uncharacterized protein 563 806 - -
Mupr6393g00002 1046 Gene3D Cupin 832 1017 - -
Mupr6393g00002 1046 Gene3D Cupin 562 809 - -
Mupr6393g00002 1046 MobiDBLite consensus disorder prediction 59 81 - -
Mupr6393g00002 1046 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
Mupr6393g00002 1046 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 1045 IPR045109 GO:0032454|GO:0033169
Mupr6393g00002 1046 Pfam JmjC domain, hydroxylase 895 987 IPR003347 -
Mupr6393g00002 1046 SMART cupin_9 675 1009 IPR003347 -
Mupr6393g00002 1046 MobiDBLite consensus disorder prediction 137 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6393g00002 Mupr-Chr6393 26413 32027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6393g00002 15 144 GRF Transcription Factor Family AT4G37740 25.385 5.38e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr6393g00002 JmjC 4.4e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6393g00002 K15601 - gmx:100810673 1585.47