Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6382g00004 ATGGTGTGTTGGAAACCGGTGGAAGAGTCAGAGTCTACAAAAATGACCTTACCTAAGGGGGTAAAGCAAGCAAATAAGGGCTCAATTATGAACAACAACTGGCTTTCGTTCCCTCTTTCTCCTACTCATTCTTCCTTACCGACTCATGATCTTCAAGCAACTCAATATCATCAATTTTCTCTTGGGTTAGTGAATGAGAACATGGAAAACCCTTTTCAAAATCATGATTGGAATCTGATTAACACTCATAGCAGCAACGAAGTTCCAAAAGTTGCTGATTTTCTTGGAGTGAGCAAGTCTGAAAATCAGTCAGACCTTGCTGCCTTAAACGAAATTCAGTCAAATGATTCTGATTATCTGTTCACAAACAACAGTCTAGTGCCTATGCAAAACCCAGTAGTGGACACACCTAGCAATGAGTATCAAGAAAATGCTAATAGTAATTTGCAATCGTTGACATTATCCATGGGAAGTGGTAAGGATTCAACGTGCGAAACCAGCGGGGAAAATAGTACAAACACTGTTGAAGCTGCTGCACCTAGAAGAACTTTGGATACATTCGGGCAGAGAACATCAATATATCGTGGTGTAACGCGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGACAATCAAGAAAAGGACGCCAAGGTGGATATGATAAAGAAGAGAAAGCAGCTAGGGCTTATGATTTAGCTGCACTGAAGTACTGGGGAACATCCACCACTACCAACTTTCCAATTAGCAACTATGAGAAGGAATTGGATGAAATGAAACATATGACCAGACAAGAATTTGTTGCCTCCATTAGAAGGAAAAGCAGTGGTTTCTCCAGGGGTGCATCAATGTATCGCGGAGTTACAAGGCATCACCAACACGGCAGATGGCAAGCAAGGATTGGCAGAGTCGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAGGCTGCAGAAGCTTACGACATAGCAGCAATAAAGTTCAGAGGTCTGAACGCTGTGACCAACTTTGACATGAGTCGCTACGACGTGAAAGCTATTCTCGAAAGCAACACTCTCCCAATAGGAGGAGGTGCGGCTAAACGTCTAAAAGAAGCTCAAGCTCTAGAATCTTCGAGGAAACGCGAAGAGATGATTGCACTTGGCTCATCAACTTTCCAGTATGGAACCTCAAGCTCTAGCAGGCTTCACGCTTACCCTCTAATGCAGCAGCACCAGTTCGAGCAACCTCAACCTTTGCTAACTTTGCAAAACCACGACATCGGTTCCCACTTCTCTCACCAAGACCCTTCGTCGCTGCACCAGGGTTACATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGCGCTTCTTCTTACCTTCAGAATAACGCTCAGTTCTACAACGGTTACCTTCAGAACCACCCTGCATTGCTTCAGGGAATGATGAACATGGGGTCTTCTTCTTCTTCTTCTTCAGTGTTGGAGAATAACAATAATAATCATAGTAATGTTGCTGGGTTTGTAGGGAGTGGGTTTGGTATGGCTTCGAATGCATCGTCGAGTAACGCGGTGGGGACGGCGGAGGAACTAGGATTGGTCAAGGTTGACTATGACATGCCCGCCGGAGGTTACGGCGGCTGGTCGGCGGCGGCGGCGGAGTCCATGCAGACGTCAAATGCTGGGGTGTTCACAATGTGGAATGACTGA 1725 0.4545 MVCWKPVEESESTKMTLPKGVKQANKGSIMNNNWLSFPLSPTHSSLPTHDLQATQYHQFSLGLVNENMENPFQNHDWNLINTHSSNEVPKVADFLGVSKSENQSDLAALNEIQSNDSDYLFTNNSLVPMQNPVVDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTNTVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSTFQYGTSSSSRLHAYPLMQQHQFEQPQPLLTLQNHDIGSHFSHQDPSSLHQGYIQTQLQLHQQSGASSYLQNNAQFYNGYLQNHPALLQGMMNMGSSSSSSSVLENNNNNHSNVAGFVGSGFGMASNASSSNAVGTAEELGLVKVDYDMPAGGYGGWSAAAAESMQTSNAGVFTMWND 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6382g00004 574 CDD AP2 192 258 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 ProSiteProfiles AP2/ERF domain profile. 193 256 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 SUPERFAMILY DNA-binding domain 192 258 IPR016177 GO:0003677
Mupr6382g00004 574 PRINTS Ethylene responsive element binding protein signature 194 205 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 PRINTS Ethylene responsive element binding protein signature 332 352 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 Gene3D AP2/ERF domain 292 352 IPR036955 GO:0003700|GO:0006355
Mupr6382g00004 574 Gene3D AP2/ERF domain 193 258 IPR036955 GO:0003700|GO:0006355
Mupr6382g00004 574 SUPERFAMILY DNA-binding domain 291 352 IPR016177 GO:0003677
Mupr6382g00004 574 ProSiteProfiles AP2/ERF domain profile. 292 350 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 89 450 - -
Mupr6382g00004 574 FunFam AP2-like ethylene-responsive transcription factor ANT 192 258 - -
Mupr6382g00004 574 SMART rav1_2 193 262 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 SMART rav1_2 292 356 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 FunFam AP2-like ethylene-responsive transcription factor 291 352 - -
Mupr6382g00004 574 CDD AP2 291 352 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 Pfam AP2 domain 193 248 IPR001471 GO:0003700|GO:0006355
Mupr6382g00004 574 Pfam AP2 domain 293 342 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6382g00004 Mupr-Chr6382 23841 27551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6382g00004 32 574 AP2-EREBP Transcription Factor Family AT3G20840 62.167 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr6382g00004 AP2 2.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6382g00004 K09285 - gmx:100788471 986.097