Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6380g00002 ATAATAGATACAAAAGATATTGTCAGACGACACCAACCTAATCCAGAATCCTCTTCCAGCAAAAAGTCAAGATGGTTTTCAAGATCATGTACTCCCAAATTAAGCAAGGAATTACTTGTAGCTTCTTCCCTTCTTCGAAGGTTCACCTTTGAAGATCTTAAGTTGGCAACAAGGAATTTTAGGGCTGACAATTTCCTTGGTGAGGGAGGGTTTGGAACTGTGTTGAAAGGTTGGATCAGTCAGAATGGGAACCATGCAGCAAGGCCTGGAATGGGGACTCCGGTTGCAGTGAAGTGTCTCAACCTACATGGATTTCAGGGTCATAAGGAATGGCTTGTATGTCACCATGCTACCCCCGAATATGCTGAAATTAGTTATCTCAGTGAACTCCATCATCCACATCTGGTTAAATTGGTTGGCTTTTGCATCGAGGGTAACAAAAGACTACTGGTATATGAGTTTATGTGCCGAGGAAGCTTAGAGAAGCATCTGTTCAGGACAGGAAATATGCACCTTCCGTGGCATCTGAGAATTAAAATTGTGACTGGTGCCGCAAAGGGCCTTCTATTTTTGCATGAGGAAGCTTCAAGGCCAGTGATATTTAGAGACTTCAAAACTTCAAATATCCTTTTGGATATGAACTACAATGCAAAGCTTTCAGATTTCGGGCTTGCAAAAGATGCTCCAGTGGGAGATGCAAGTCATGTCTCTACTCAAGTAATGGGAACACAAGGCTATGCAGCCCCAGAATATGTTATGACAGGACACCTTACCTCCAAGAGTGATGTCTATAGTTTTGGGGTGGTTCTACTTGAAATACTGACAGGTAGAAAAGCCATGGAGACTAAAATGCCTAAGGATCAGCAAAACTTGGTGGAATGGTTGCGCCCTCTCTTAAGAAACAAAGCTAATTTCACCTATCTGATGGATCCTAGACTTCATGGTGAATACTCAATGAGAGGTGCTCAAATTGCAATGAGGTTGGCCACTCACTGTGTTCGCTCTGACCCAAAAGCAAGACCCCTCATGAGTGAAGTGGTTCGTGTGTTGAAGTCTGTGCCTCTTTTTGATGAAGTGGATGCTCACCCTAGTCCCTCATCCTCAATTCCCTCAATCTCAACTCCCTCCAACTCCATCCGTGGTTCTAACAAGTATGGTCTTAGAACTTCTCCAGCACCAAACGTTCAAAGCCGCTTTCAAGCCTCACCACTGGGGCAAGACTACCCTCTTCCTCCGCCAAACCCTAGCATTGCATCGTCGTCCAACCCTAGTGTTGGACAACCA 1284 0.4447 IIDTKDIVRRHQPNPESSSSKKSRWFSRSCTPKLSKELLVASSLLRRFTFEDLKLATRNFRADNFLGEGGFGTVLKGWISQNGNHAARPGMGTPVAVKCLNLHGFQGHKEWLVCHHATPEYAEISYLSELHHPHLVKLVGFCIEGNKRLLVYEFMCRGSLEKHLFRTGNMHLPWHLRIKIVTGAAKGLLFLHEEASRPVIFRDFKTSNILLDMNYNAKLSDFGLAKDAPVGDASHVSTQVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRKAMETKMPKDQQNLVEWLRPLLRNKANFTYLMDPRLHGEYSMRGAQIAMRLATHCVRSDPKARPLMSEVVRVLKSVPLFDEVDAHPSPSSSIPSISTPSNSIRGSNKYGLRTSPAPNVQSRFQASPLGQDYPLPPPNPSIASSSNPSVGQP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6380g00002 428 Pfam Protein tyrosine and serine/threonine kinase 63 349 IPR001245 GO:0004672|GO:0006468
Mupr6380g00002 428 MobiDBLite consensus disorder prediction 364 403 - -
Mupr6380g00002 428 Gene3D Phosphorylase Kinase; domain 1 35 154 - -
Mupr6380g00002 428 ProSitePatterns Protein kinases ATP-binding region signature. 66 98 IPR017441 GO:0005524
Mupr6380g00002 428 MobiDBLite consensus disorder prediction 360 428 - -
Mupr6380g00002 428 MobiDBLite consensus disorder prediction 1 24 - -
Mupr6380g00002 428 FunFam Serine/threonine-protein kinase BIK1 27 154 - -
Mupr6380g00002 428 CDD STKc_IRAK 66 351 - -
Mupr6380g00002 428 Gene3D Transferase(Phosphotransferase) domain 1 155 360 - -
Mupr6380g00002 428 SUPERFAMILY Protein kinase-like (PK-like) 44 379 IPR011009 -
Mupr6380g00002 428 PANTHER OS01G0588500 PROTEIN-RELATED 24 352 - -
Mupr6380g00002 428 MobiDBLite consensus disorder prediction 1 17 - -
Mupr6380g00002 428 FunFam Serine/threonine-protein kinase PBS1 155 364 - -
Mupr6380g00002 428 ProSiteProfiles Protein kinase domain profile. 60 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6380g00002 Mupr-Chr6380 16447 20163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6380g00002 48 369 Glycoside Hydrolase AT3G07070 48.503 8.60e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr6380g00002 PK_Tyr_Ser-Thr 6.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6380g00002 - - ccaj:109817012 598.971