Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6379g00003 ATGATTCTCCAACACGCTTCTCCCTCCTCTCACTTCTACTTCTCTCCGCTCTCCCCCTCCCTCTGTCCCTGTAACGCCGCATTTCCCTTCTCCAGAAGAAGGAGAAAATGCTTATTCGCCAATTTCGGCTCCCGCAAATTCCGCAGAAAATGCACCGTCCGCTTCTGCGCTATTCCCCCCGACCGAAATTGGAACGCCGATTTCGTCAAGAGAGGCGCCAGAAGCTTCGTTCTCAAACGAATTTCCAACGAACTCGAAGGCGATAACAACAACAACAACAACGATATTGACACCGAGTTGCAACAGCCACCACCGCCACCGGTTCAATTAGGTCCTAACTTCACCGGCTTCAGCGAGGATCCTATTGTGGATAAGCTGAGGACGCAGCTAGGGGTGATTCACCCGATTCCGTCCCCTCCGATTAACCGCAACGTCGTTGGCCTCTTCGTCTTCTTTTTCTTCGTCGGTGTCGTTTTCGACAAACTGTGGACTTCGAGACGGAGGAGCAAAAACAGCAGAGATGACAGGCTGCGCGGCGGCGCGTGGCCGCAGGTGCCGACAAGCTTCTCGCTGTTTCTGGAGAAGGATTTGCAGAGGAAGGAGTCAGTGGAGTGGGTGAACATGGTGCTGGGGAAGCTATGGAAGGTGTATAGAGGTGGAATCGAGAACTGGATTATAGGGCTGCTTCAGCCTGTGATTGATAACCTGAAGAAGCCTGATTACGTGCAGAGGGTTGAGATTAAGCAGTTCTCATTAGGGGACGAACCCTTGTCTGTTAGGAATGTTGAGCGCAGGACTTCTCGCAGGGTCAACGATTTGCAGTACCAGATAGGCCTTAGGTATACAGGTGGTGCTCGCATGCTGTTAATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTAAGACTAATACCAACAGAACCTTGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCTAAGATCAAGTTTGAACTGTCTCCATTCCGTCTGTTCAATTTAATGGGGTTGTTAAATGGCGGCACCATGGTCGCTATGGCGTGGCAATTTTTTGCCAACTGCCATAGGCTATTTGTGAAAGGAGGCCAGCAGCAAAGCTGCAATGGCGTGTTTATATGGTGGAATTTTGGTCTTCCGTCATCCGCCATTGATAACATTGGGAACAGTGCGTACACCCACCTACTTGTCCTAAGGTTTTTGACTAAACTTCTAACAGAAGATTTACCTAGACTATTTGTACGCCCAAAGAAAATTGTTTTAGATTTCCAAAAGGGAAAAGCTGTTGGTCCAGTAGCTGTTGGTGTTAAATCTGGAGAAATGCAAGAAGGAAACAAGGATTATGTGGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATCTTCTATGGCAAGACAGATCCTTATGTTATTCTTGGCCTTGGAAACCAAGTTATACGCAGCAAAAAGAATAGTCAAACTACTGTAATTGGGCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTATTCATCCAAGTAAAGGACGCTCTAGGTTTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTAAAGACACGGTACCAACAGACAGAATTGTGGTTTTACAAGGAGGTTGGGGAGTTTTAGGAAAGCGCTCTTCTGGGGAGATATTACTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGATAAAACTGAGGTGGATTCCGTTGATACTTATGCTTCTGATGATGAGTTGTCTGATTCAGAAACAAATGTCACTAATGAGAAGGATGAAAGAGATTCTATGTATGTAACAGATAAAGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGGGTTTAGCAAAGTGTTGGATAATGGCTCAAATGCTGGGTTTAAAGTGTCAAAATCAAAATCTGCAGTTCCCAATGCTGAACCAATTCCTTCTAGTTCTGATAATTCTGAAGGCTTGGGAGGTTGGGCAGTAGATACAATTAGATAA 2145 0.4503 MILQHASPSSHFYFSPLSPSLCPCNAAFPFSRRRRKCLFANFGSRKFRRKCTVRFCAIPPDRNWNADFVKRGARSFVLKRISNELEGDNNNNNNDIDTELQQPPPPPVQLGPNFTGFSEDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRSKNSRDDRLRGGAWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMGLLNGGTMVAMAWQFFANCHRLFVKGGQQQSCNGVFIWWNFGLPSSAIDNIGNSAYTHLLVLRFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPVAVGVKSGEMQEGNKDYVGELSVTLVDARKLSYIFYGKTDPYVILGLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPKKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGVLGKRSSGEILLRLTYKAYVEDEEDDKTEVDSVDTYASDDELSDSETNVTNEKDERDSMYVTDKESFMDVLAALIVSEEFQGIVASETGFSKVLDNGSNAGFKVSKSKSAVPNAEPIPSSSDNSEGLGGWAVDTIR 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6379g00003 714 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 199 442 IPR031468 GO:0008289
Mupr6379g00003 714 ProSiteProfiles C2 domain profile. 455 571 IPR000008 -
Mupr6379g00003 714 Pfam C2 domain 468 564 IPR000008 -
Mupr6379g00003 714 SMART C2_3c 469 570 IPR000008 -
Mupr6379g00003 714 CDD SMP_SF 221 356 - -
Mupr6379g00003 714 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 63 355 - -
Mupr6379g00003 714 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 468 596 IPR035892 -
Mupr6379g00003 714 CDD C2 470 564 - -
Mupr6379g00003 714 Gene3D C2 domain 454 597 IPR035892 -
Mupr6379g00003 714 MobiDBLite consensus disorder prediction 681 714 - -
Mupr6379g00003 714 MobiDBLite consensus disorder prediction 681 705 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6379g00003 460 561 C2H2 Transcription Factor Family AT4G05330 33.981 3.13e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6379g00003 - - rvl:131301663 775.007