Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6378g00002 AATGCTGACTGGACAACTATATATAAGCGCCAAGAATTCATCATGGCTCTTCATGAGTTACACCACGTGGCTGAAGGCAAACTTGATCCTAAAGAGATGAACAACACACGTGGAGCTGATCAATCTTCCCCACCCCATAATGATTTGTTTGAGCTGGTTTGGGAGAAGGATCAGATTTCAGTGCCGGGTCAGTCAAGTAGAGCTAGAAAGAGCCCAAATTGTACAAGTTTGCCACCTCACACTCCAAGGGGTGAAGTAGGATATGCTAATAACAATGCTACCATTACAAAGATGGGGAAGTATTATGGGAATTTAAGTGGTGAATTGAATGAAAATAAAAGGCTGGTCCCTTCAGGTGACGTGAATTTAAGTGAAGAAGAGGAAGACATGGTGATGCCTTGGTTGAATTATGGAATGGACGAGTCTTTGCAACATGGATATAGTTCTGATTTTTTCCATGAACTATCTGGGGTCACCATGAATGAGCCCTCACCCTCAAATAATTTTTCTTTGCTAGATAGAAGAAATAATAGTAATAAGGTATTTAGGGACACTCATAAACACTCTTCATTTGCATCTTTTAGATCCAAGGTGGTAGATATAGCTGAAAATAATGGTACCATGATGGAGAGGCAAGGTCCAGTTATGTGTAGCAATAGTTCCACCATGATGAACTTTTCCCATTTTGCAAAACCAGTTGCAATGGTCAAAGCTAATCTTCAGAACATTGGGTTGACATCAAGATCAGAAAGTGTGGGAATAAAGAATAGAGGTGCTGCTGCAACTGTAACCAATCCTGTTGAATCTACAAAGTGTGAAACTTTTTGCAAACAAGTGTCCAAGATTGGTCAAACTTCAAATCTAGTTGTTGGTGAAAGTGGGAATAAAGGACAGGAAGCTGTTGATAAAAGTGTGGAGCCAGCTGTGGTCTCTTCCTCTGTTTGCTCTGGCAATGGCGCAGAGAGGGCTTCGGATGACCCAAATCAAGATTTGAAGCGAAAAAGTAGAGACATTCAGGAGTTTGAGTGCCAAAGTGAAGATGTTGAGGAAGAATCAGTTGGTGTCAAGAAGGAAGTTCCTGCACGACGTGTTGGTTCCAAGAGAAGCCGTTCGGCGGAAGTGCATAATCTATCTGAAAGGAGACGAAGAGTCAAGATCAATGAAAAGATGCGTACATTACAAGAACTCATTCCAAATTGCAATAAGGTTGACATTTGCTTTCTCGGGGATAAAGCCTCAATGTTGGATGAAGCGATCGAGTATATTAAAACACTTCAACTCCAGCTTCAAATAATGTCAATGGGATCTGGATTATATATGCCTGCAATGATGTTACCTCCACACATGCATGCACCACATGTGGGTTCTTTTTCACCTATAGGAGTTGGCATGCAAATGAGGTTAGGAATGGGCATGCCTGATGCTAATGATGAGTCTTGTAGATTTCCAATGATGCAAGGAACTCAAATGCCAAGATCAAATGCTCAAGTGTTTGGGCTTCCTAGTCAGGGTCACCCCATGCCAATGCCACATGCTCCAATATTTTCTTTTTCAGGAGAACCTTTTATTAATCCATCAACTTTAGGAATAAATGCCTGTGGAACACCACTTGTGGATAGGGCTTCAGCCTCTAGCTTAAAGGATCCAAATCCAATGCCACATGTGAAATCACAAGTTGTACAAAACACCAGCGGTTGTAACTCAACTAACTAA 1713 0.4139 NADWTTIYKRQEFIMALHELHHVAEGKLDPKEMNNTRGADQSSPPHNDLFELVWEKDQISVPGQSSRARKSPNCTSLPPHTPRGEVGYANNNATITKMGKYYGNLSGELNENKRLVPSGDVNLSEEEEDMVMPWLNYGMDESLQHGYSSDFFHELSGVTMNEPSPSNNFSLLDRRNNSNKVFRDTHKHSSFASFRSKVVDIAENNGTMMERQGPVMCSNSSTMMNFSHFAKPVAMVKANLQNIGLTSRSESVGIKNRGAAATVTNPVESTKCETFCKQVSKIGQTSNLVVGESGNKGQEAVDKSVEPAVVSSSVCSGNGAERASDDPNQDLKRKSRDIQEFECQSEDVEEESVGVKKEVPARRVGSKRSRSAEVHNLSERRRRVKINEKMRTLQELIPNCNKVDICFLGDKASMLDEAIEYIKTLQLQLQIMSMGSGLYMPAMMLPPHMHAPHVGSFSPIGVGMQMRLGMGMPDANDESCRFPMMQGTQMPRSNAQVFGLPSQGHPMPMPHAPIFSFSGEPFINPSTLGINACGTPLVDRASASSLKDPNPMPHVKSQVVQNTSGCNSTN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 61 87 - -
Mupr6378g00002 570 SMART finulus 376 431 IPR011598 GO:0046983
Mupr6378g00002 570 FunFam Basic helix-loop-helix transcription factor 365 434 - -
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 542 570 - -
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 325 342 - -
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 312 345 - -
Mupr6378g00002 570 CDD bHLH_AtPIF_like 370 438 IPR047265 -
Mupr6378g00002 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 367 437 IPR036638 GO:0046983
Mupr6378g00002 570 Coils Coil 331 358 - -
Mupr6378g00002 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 370 425 IPR011598 GO:0046983
Mupr6378g00002 570 Gene3D - 365 433 IPR036638 GO:0046983
Mupr6378g00002 570 Pfam Helix-loop-helix DNA-binding domain 374 426 IPR011598 GO:0046983
Mupr6378g00002 570 PANTHER TRANSCRIPTION FACTOR PIF3 274 568 IPR044273 GO:0003700|GO:0006355
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 555 570 - -
Mupr6378g00002 570 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6378g00002 Mupr-Chr6378 6166 9932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6378g00002 15 452 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 39.913 1.00e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6378g00002 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6378g00002 K12126 - gmx:102659557 692.189