Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6370g00009 ATGCTTGGTGGATGTAGCTTCCATGTGTCAGAAGCCTGTTCGATAGCTTTAATCTGTGAGGTTCTGATATTTTTCCTCAGAATCATGGAGGTGGCTGGTCTAATTAAACACACTTGTGACAAGTTGAACATGACAGGGAAGAGAAACCAAACTCAAACAAGCCCTGTGGGAAGTCCAACATCGGGCAACATATCAGACAGTTCCTCAAAAGAACAAGACAGGTTCCTTCCCATAGCCAACGTTAGCCGCATCATGAAAAGGGCACTCCCAGCCAATGCTAAAATCTCAAAGGAGGCCAAGGAAACGGTTCAAGAGTGTGTCTCTGAGTTCATAAGCTTCATCACTGGCGAAGCCTCCGACAAGTGCCAGAGAGAAAAGAGGAAGACAATCAACGGTGATGATCTTCTCTGGGCCATGACAACCCTTGGCTTTGAGAACTATGTTGGACCCTTGAAGCTCTACCTCAACAACTACAGAGAAACTGAGGGAGAAAAAAGTTCTGTTGTCAAACAAGAGGAACACTCTCCCTCTGACCAACCCCAAACCAATGATCATGGAAACTTGCATCATTCTCTCACCACCAACACTTTCAGTGCTGGCTTCTACTCTGTGGGCCCCACTTCAAAGACCTTCAATTCTGATCAAGGTGCAAGTGCAAATAGAACCATGCCACCTAATCTACGTTATAGGGTTGAATGGTAG 702 0.4573 MLGGCSFHVSEACSIALICEVLIFFLRIMEVAGLIKHTCDKLNMTGKRNQTQTSPVGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKLYLNNYRETEGEKSSVVKQEEHSPSDQPQTNDHGNLHHSLTTNTFSAGFYSVGPTSKTFNSDQGASANRTMPPNLRYRVEW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6370g00009 233 MobiDBLite consensus disorder prediction 173 190 - -
Mupr6370g00009 233 PRINTS CCAAT-binding transcription factor subunit A signature 122 140 - -
Mupr6370g00009 233 PRINTS CCAAT-binding transcription factor subunit A signature 103 121 - -
Mupr6370g00009 233 PRINTS CCAAT-binding transcription factor subunit A signature 141 159 - -
Mupr6370g00009 233 SUPERFAMILY Histone-fold 72 182 IPR009072 GO:0046982
Mupr6370g00009 233 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 52 185 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr6370g00009 233 MobiDBLite consensus disorder prediction 209 233 - -
Mupr6370g00009 233 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 75 139 IPR003958 -
Mupr6370g00009 233 MobiDBLite consensus disorder prediction 164 190 - -
Mupr6370g00009 233 ProSitePatterns NF-YB/HAP3 subunit signature. 106 122 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr6370g00009 233 Gene3D Histone, subunit A 62 191 IPR009072 GO:0046982
Mupr6370g00009 233 FunFam Nuclear transcription factor Y subunit B-3 64 188 - -
Mupr6370g00009 233 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6370g00009 Mupr-Chr6370 58925 60966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6370g00009 57 172 CCAAT-HAP3 Transcription Factor Family AT4G14540 78.448 8.69e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr6370g00009 CBFD_NFYB_HMF 1.3e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6370g00009 K08065 - gmx:100810059 292.352