Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6364g00002 ATGGCATCATCTTGGACTCCAAGGCAGAACAAATTGTTTGAACAAGCCCTGGCTTTATATGACAAGGAAACCCCTGAGAGATGGCAGAATGTTGCCCATGTGGTGGGAAGATCGGTGGAGGAGGTTAAAAGGCACTATGAGATCCTCAAAGAAGACATCAAACGCATTGAACATGGCCAAGTTCTTGAAGATCCAGAATCCACTAAGTATTAA 213 0.4413 MASSWTPRQNKLFEQALALYDKETPERWQNVAHVVGRSVEEVKRHYEILKEDIKRIEHGQVLEDPESTKY 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6364g00002 70 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Mupr6364g00002 70 CDD SANT 4 50 IPR001005 -
Mupr6364g00002 70 SMART sant 1 52 IPR001005 -
Mupr6364g00002 70 Gene3D - 2 62 - -
Mupr6364g00002 70 Coils Coil 39 59 - -
Mupr6364g00002 70 Pfam Myb-like DNA-binding domain 3 46 IPR001005 -
Mupr6364g00002 70 FunFam Transcription factor SRM1 1 62 - -
Mupr6364g00002 70 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 61 IPR044636 GO:0003700
Mupr6364g00002 70 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6364g00002 Mupr-Chr6364 23143 24178 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr6364g00002 Myb_DNA-binding 1.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6364g00002 - - lja:Lj4g3v0973380.1 118.627